| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0704 |
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| Symbol | |
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| ID | 6088843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 767509 |
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| End bp | 768288 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641595765 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_001719458 |
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| Protein GI | 170022953 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0720093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATGG GAATCGATAT TCATGCCATG ACGGCTCCGC TATTCGCACT CTGGCTACCT
TTTGTCAGGA TTTTGTCGTT TTTGCATTTT TGTCCGGTTA TTCGGCATAA AGCCTTTACC
CGCAAAGCCA AGATTGGCAC CGCGCTGTTA CTGGCCATTT TGATAACCCC AATGATCAGC
CAACCGGTGG TATCCGAGGA GTTGCTCTCG ATAGAAAACC TCTTATTGGC CGGTGAACAA
ATTCTGTGGG GCTGGTTATT TGGCTCCATG TTGCATTTGG TACTTGCCGC ATTAGAGGCC
GCGGGTCAGA TTCTATCGAT GAATATGGGC CTGGGTATGG CAATGATGAA TGACCCCACC
AGCGGAGCAT CGACGGCGGT TATCTCACAA ATAATCTTTA CTTTCAGTGT GTTGATTTTT
TTTACCCTTA ATGGCCACTT ACTGTTTGTC ACCATTTTGT TGAAAAGTTT CAGTAGCTGG
CCTATCGGCG AAGCCATCAA TGATTTTTCA CTACGTTCAT TGGCACTGAG CCTTGGCTGG
ATCCTTTCAT CGGCCACGCT GTTAGCACTG CCTACCACTT TTATCATGCT GATCGTGCAA
GGGTCTTTCG GGTTACTGAA CCGTATCTCC CCCACGTTAA ACCTGTTTTC ACTGGGTTTC
CCTATCGGCA TGTTGTTTGG CCTGCTGTGC CTGCTGCTGT TAGCGATCAA TATCCCTGAT
CATTATCTTC ATCTGACCAA TGAGATCCTG ACACAGTTTG AACGGATGAA GGTGCACTGA
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| Protein sequence | MPMGIDIHAM TAPLFALWLP FVRILSFLHF CPVIRHKAFT RKAKIGTALL LAILITPMIS
QPVVSEELLS IENLLLAGEQ ILWGWLFGSM LHLVLAALEA AGQILSMNMG LGMAMMNDPT
SGASTAVISQ IIFTFSVLIF FTLNGHLLFV TILLKSFSSW PIGEAINDFS LRSLALSLGW
ILSSATLLAL PTTFIMLIVQ GSFGLLNRIS PTLNLFSLGF PIGMLFGLLC LLLLAINIPD
HYLHLTNEIL TQFERMKVH
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