Gene YPK_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0703 
SymbolflhB 
ID6089500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp766376 
End bp767509 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content45% 
IMG OID641595764 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_001719457 
Protein GI170022952 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.246065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGCA GCAGTGGTGA GAAGAGTGAA AAACCCACAG CGGGGAAGCT GTCGAAAGCC 
AGAAAAAAAG GCGATATTCC CCGTTCTAAA GATGTCACCA TGGCCGCAGG GTTAGTGACC
TCTTTTATTC TGCTATCGCT ATTTCTACCT TATTATAAGG CGTTGGTTTC TCAATCATTT
GTGTCTGTTG CTCAGTTGGC AAGTCAGCTT GATGACCAAG GCGCTCTTGA GCAATTTCTG
CTAGCCAATC TGTTTATTTT CGCCAAATTC TTAGCCACGC TGATCCCGAT CCCGTTGTTC
AGTATGTTGG CAACCTTAAT ACCCGGCGGG TGGAATTTCA CCCCGGTAAA ACTGATACCT
GACCTGAAAA AGCTCAGTCC ATTGGCGGGT ATTAAGAGAA TATTCTCCGC CAGCAATGGC
ACTGAAGTGC TTAAGATGTT GGCAAAATGC AGCATCGTGC TGTACACCCT CTATCTGGTC
GTGCATAGCT CACTTGATGA TTTATTGCAC TTGCAGACAC TGCCACTAGA AGAAGCGATT
ACGCAGGGAT TTGCCCAGTA CCACCATATT TTGCTGTATT TCATTGCAAT TGTTGTCGTT
TTTGCCGCCA TTGATATTCC TCTCAGTCAT CATCTGTTTA CCAAAAAAAT GAAAATGACC
AAACAGGAGG TCAAACAAGA GCATAAAAAT AATGATGGTA ATCCAGAAAT TAAATCTCGG
GTCCGTCAAC TACAACGCCA ATATGCTATC GGTCAAATTA ATAAAACGGT TCCCAGCGCC
GACGTTATTA TTACTAACCC AACCCATTTC TCGGTTGCAT TAAAATATGC ACCCGAAAAA
GCCAGTGCTC CCTATATTGT CGCCAAAGGG AAAGATGATA TTGCCTTGTA TATTCGGAGC
ATTGCGCAAA AACACAAAAT AGAAATTGTC GAGTTTCCAC CATTAGCGCG CGCTATTTAC
CATACCACCA AGGTTAACCA ACAGATACCC GCCCAGCTTT ATCGTGCTAT CGCTCAGGTG
CTGACCTATG TCATGCAGAT CAAGTCATGG CGTTCCGGGC AGGCAAGCAA GCCGGTATTA
AACACTCACC TTGGGCTTCC CAAAGAGATG CAACGATTCC ATGATGAAAC ATAA
 
Protein sequence
MSSSSGEKSE KPTAGKLSKA RKKGDIPRSK DVTMAAGLVT SFILLSLFLP YYKALVSQSF 
VSVAQLASQL DDQGALEQFL LANLFIFAKF LATLIPIPLF SMLATLIPGG WNFTPVKLIP
DLKKLSPLAG IKRIFSASNG TEVLKMLAKC SIVLYTLYLV VHSSLDDLLH LQTLPLEEAI
TQGFAQYHHI LLYFIAIVVV FAAIDIPLSH HLFTKKMKMT KQEVKQEHKN NDGNPEIKSR
VRQLQRQYAI GQINKTVPSA DVIITNPTHF SVALKYAPEK ASAPYIVAKG KDDIALYIRS
IAQKHKIEIV EFPPLARAIY HTTKVNQQIP AQLYRAIAQV LTYVMQIKSW RSGQASKPVL
NTHLGLPKEM QRFHDET