Gene YPK_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0672 
Symbol 
ID6087536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp736462 
End bp737499 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content52% 
IMG OID641595735 
ProducttonB-system energizer ExbB 
Protein accessionYP_001719428 
Protein GI170022923 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATAG CTGGCAAAGA GAGTAAAGAG ATATCACGAG TGCAAGGCCG GGTGATGAAA 
GGCGTGATGG TATTATTACT GGCTACAGGT TTAGCGGGCC ATGCACAAGC CGCACCAGGC
AACGGCAGTG CGGTTGCGGC TACGGTTACC GCACCTACAG CGGCAACGTC AACCCCGTTA
CCTGCACCAG AAATTACCTC GGTTGCTGCA ATACCGGAAT CAACACCAGA GTCAGTATTA
ACATCAGCAT CAGCATTAAC CTCAGAATCA ATACCGGCCC CTATGGTTCA GCCCGTTACG
GCTCCAGTAT CACAAAAGCT GGCGATGGAT TTATCTGTCT GGGGTATGTA TCAGAATGCG
GACGTGGTTG TTAAAGGCGT CATGATTGGC CTGGTGCTGG CTTCTATCGT CACTTGGACC
ATTCTGTTCT CTAAAGGGAC TGAATTGTTC CGCGCTCGTC GTCGGTTGCG CCAAGAGCAT
GAAGTGATTG GGGCCGTGAC CGATCTTGAT ACCGCTTCAG AGCGAGCAGA AGATTTTGGT
CAAGGCAGCG TAAGCAGTTT GTTACTGCGT GAAGCACTGA ACGAGCGCCT GTTGTCGATA
GAGTCAAATG ACAATAATGG CATTAAAGAA CGTACTGCTT TCCGTTTGGA GCGCCGGGTA
GCCGCCATTG GTCGCCAAAT GGGCAAAGGT AATGGCTTCC TGGCAACGAT CGGCGCGATT
TCCCCCTTTG TCGGTTTGTT TGGTACGGTT TGGGGCATCA TGAACAGCTT TATCGGCATT
GCCCACTCAC AGACCACCAA TCTGGCGGTT GTCGCACCAG GGATTGCCGA AGCATTATTG
GCAACGGCGT TAGGGCTGGT GGCTGCGATC CCAGCGGTCG TTATTTATAA TATCTTTGCT
CGCCAGATCG GAAATTATCG CGCTCAAGTA GGTGATGTCG CGGCACAAGT GTTACTGCTG
TTGAGCCGTG ATTTGGATTT GGCCAGTAGC GCCGAAGTAA AGTCCCCTCG CCATCCTCAT
CAATTACGAG CAGGGTGA
 
Protein sequence
MKIAGKESKE ISRVQGRVMK GVMVLLLATG LAGHAQAAPG NGSAVAATVT APTAATSTPL 
PAPEITSVAA IPESTPESVL TSASALTSES IPAPMVQPVT APVSQKLAMD LSVWGMYQNA
DVVVKGVMIG LVLASIVTWT ILFSKGTELF RARRRLRQEH EVIGAVTDLD TASERAEDFG
QGSVSSLLLR EALNERLLSI ESNDNNGIKE RTAFRLERRV AAIGRQMGKG NGFLATIGAI
SPFVGLFGTV WGIMNSFIGI AHSQTTNLAV VAPGIAEALL ATALGLVAAI PAVVIYNIFA
RQIGNYRAQV GDVAAQVLLL LSRDLDLASS AEVKSPRHPH QLRAG