Gene YPK_0649 details

Gene Information

• Locus tag: YPK_0649
• Symbol: ribB
• ID: 6087429
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 709990
• End bp: 710643
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641595712
• Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase
• Protein accession: YP_001719405
• Protein GI: 170022900
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
• TIGRFAM ID: [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAGA CGCTTCTCTC AGATTTTGGC ACGCCTGTTG AGCGTGTAGA ACGTGCAATC 
GACGCCCTGC GTAATGGCCG TGGCGTTATG GTGTTGGATG ACGAAAGTCG TGAAAACGAA 
GGCGATATGG TTTTTGCTGC CGAAGCAATG ACGCTAGAGC AAATGGCTCT GACCATCCGC 
CACGGTAGTG GCATTGTCTG TCTGTGTATC ACTGATGAAC GCCGCCAGCA GCTTGATTTA 
CCCATGATGG TTACCCATAA CTCCAGCCAA TTCCAGACAG CGTTTACCGT GACAATTGAA 
GCGGCGGAAG GTGTGACGAC TGGGGTTTCT GCGGCTGACC GTCTGACTAC TATCCGTAAG 
GCAATCGCTG ATAACGCTAA ACCTGCTGAT CTTAATCGGC CGGGGCATGT ATTCCCGCTG 
CGTGGTCAAC CTGGTGGCGT ATTATCACGC CGTGGTCATA CCGAAGCGTC TATCGATTTG 
GCGACACTGG CAGGTTACAA ACCGGCTGGT GTGCTGTGTG AACTGACCAA TGACGACGGT 
AGCATGGCTC ATGCTCCAGA AGTGATTGCG TTTGCTAAAT TGCATGATAT GCCCGTCGTG 
ACGATTGACG ATTTGGCGGC TTATCTCCAA TCTCGCGCGA AGAAAGCCAG CTAA 

 

Protein sequence

MNQTLLSDFG TPVERVERAI DALRNGRGVM VLDDESRENE GDMVFAAEAM TLEQMALTIR 
HGSGIVCLCI TDERRQQLDL PMMVTHNSSQ FQTAFTVTIE AAEGVTTGVS AADRLTTIRK 
AIADNAKPAD LNRPGHVFPL RGQPGGVLSR RGHTEASIDL ATLAGYKPAG VLCELTNDDG 
SMAHAPEVIA FAKLHDMPVV TIDDLAAYLQ SRAKKAS