| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0623 |
|---|
| Symbol | |
|---|
| ID | 6090962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 683417 |
|---|
| End bp | 684871 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641595685 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001719379 |
|---|
| Protein GI | 170022874 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCA ACCTGCCCGG AATGTATTTG TATTACCTTT CAAGAGATAA TTTGGCCCCC
GAAGAATACG AACGGATAAT CAGCCCTCAC GCTGCCTGGG CGCGTATCTG CCGCGAATAT
GAATTTGACG ACAATCACAA TACCCGCCGT TACCTTATCA ATATGCGGGA GCGTGAACAG
CGATTCTCTC CGGATCAGGC ACGTCCAGGC GGGATACGTG AAAAAGAGAA ACTGGAAAAA
CTCGTTTTTT CCGGTGACGT GGTGATGTTA AGTGATATGT ACGGCCCTGC CCGGCTGTTC
TACATCAATG GTGAAGGTCA GTTGATGTCT GCCGATCCCC ATGCTTTCCG TTTCGAGGGT
GCTGCGAAGA TTATCAAGGC ATTTGACGAT TCGGTGAAAT GCCGGAACTA TCAGCTAACC
GGTGGAAAGC CACGGCCAAC GAAGATTCAG AGGCTAAGCC GGGGCTATGA ATCCCCTGCG
GAGCAATACG CACAGGCAGC AAAAAAACGG CCAACACCAT CCTCTTACCT CACTGGGGAT
AAACCTGATC TGGGGTTTGT TCCGGACTAT CCAGTATTAC GTAATACCCA TAATCTACCG
GATGAAGCTT TGCGCGCTAT GCTGGCAAAA AACAATCAGG ACGTGATGTT ACTGACATTA
GGTGAATGCT TCGAGATCGT GACTTCATGG GGTTCATGGA AAAGGGGCTG GGTGAGTTTC
AGTGAATCAA AAATAGGTCA GATTGCAATA GATTATGGAG TAAATTACGG GGTGAACGGA
AAGGATGTTG TGACCACCTC AATGATAATC AGCCAACTGG GGAGTTTCGG AATAAGGGCC
ACGACGTATA TAAACCACAA GGGCACAGAA TTGATAAAAA TCAGTGGGCA TCCGGGGATC
AGAAAAATAC TCAATGCGCC AGTTTTTGCT GCTAAAAACC CAAAGGTTGT TGATCTGGGT
ATTGGTAAGT ATGGGCTGAC AAAATCAATA GTCAAAGGCG CGAGATTAAC GTTTTATGTG
GCTGCGGCAT ATCGAACTAT TGATTTTATA CTCAATGATG CGACCTCATT AGCCGAGTAT
CTTGGCCCGT TAGCCACGGA TGTGGTGAAA ATCGGTGTGG CGTCTGCAAT TAGTTGGGGA
GTTGGGACTA TAGCTCTAGG GGTTGTTTCT ACCGTTGCAG TCCCTTTGGT TGTAGTTGTT
ATCGTAGGAT TAGTTTCTGC AATTGGTTTA AACTATTTAG ATGATAAATT TGGTGTTACA
GATAAAGTTG TTAAGTGCAT TGAAGGTGCA CAGCAAGAGT TTGTAGAAAA AGCTCGTGAG
ATGGAAAAAG GGCTTTTGGA TTTGGGGGCT ATGTATGCAG ATAGGATGCT TGATAAAGGA
AAAGAAGTTA TTGAGTATGA AGTTAGAAAC TATATCAAGG AAGTACTGAG TAACTTTAAC
ACCAGGTGGT TTTAA
|
|---|
| Protein sequence | MSFNLPGMYL YYLSRDNLAP EEYERIISPH AAWARICREY EFDDNHNTRR YLINMREREQ
RFSPDQARPG GIREKEKLEK LVFSGDVVML SDMYGPARLF YINGEGQLMS ADPHAFRFEG
AAKIIKAFDD SVKCRNYQLT GGKPRPTKIQ RLSRGYESPA EQYAQAAKKR PTPSSYLTGD
KPDLGFVPDY PVLRNTHNLP DEALRAMLAK NNQDVMLLTL GECFEIVTSW GSWKRGWVSF
SESKIGQIAI DYGVNYGVNG KDVVTTSMII SQLGSFGIRA TTYINHKGTE LIKISGHPGI
RKILNAPVFA AKNPKVVDLG IGKYGLTKSI VKGARLTFYV AAAYRTIDFI LNDATSLAEY
LGPLATDVVK IGVASAISWG VGTIALGVVS TVAVPLVVVV IVGLVSAIGL NYLDDKFGVT
DKVVKCIEGA QQEFVEKARE MEKGLLDLGA MYADRMLDKG KEVIEYEVRN YIKEVLSNFN
TRWF
|
|---|
| |