Gene YPK_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0610 
Symbol 
ID6090254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp673347 
End bp674525 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content47% 
IMG OID641595672 
ProductHNH endonuclease 
Protein accessionYP_001719366 
Protein GI170022861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACTC ATTACTCTGT TATGGATTTA GGGGAAAGAT ATGGCGCACG ATTTTCCACT 
TTGGAGGAAA TGGCTCCTTG CTTCGGTATA GATGCTAATG TGTTCATCCA GGCGTGGCTT
GAAGGGCGGC TTCCTCTTTA CATTTACTTC GGTAATGAGA GCCGACCATG TACGATCAGG
GGCTGTGTTT CCGCTAAAGT ACATGAACAC GTCATGCATG ACATACTTTA TGGCCGTGAT
TTCTATCAGA GCAAAGCTAG TCCAGACAAC GATGTATTGA TGTTTGTACC AGAAACTCCG
TTAGTCTGTA AGACTAAATT CAGGGGGGAT TACAGATTAT CAACCGGAAC TCATGCCAAC
GTGGAGAAAG GAACACATGG ACACGTTAAC AACCGCTACC CCATCGGTGT TAGCGCCCGT
GGTCGTATTG CTGATGGCGC GGTAGGTACC CTTGAGGGGC TAGGTACTTT GATGGGGCCT
TCCGCCCAAG AATATATGGC TGGTGCCTTT AATCCAGAGC AGGCCGCAAT AAATAAAGTC
CGACAGCAAA ATCAACAAGC CGCTGGCAAG GCTATTTATG ATAATACGAA AGGGGCGGTG
ACAGACGCTT ATCAGCGCAA TGGATTAGCC GGTGCGGCCG CCATGGTAGT CACGGCATCC
GTGGCGGAGT TGGCGGGTAC TAAGGGGTTG GGAACGGTAG AAAAAGTTGG CACATTAGGC
GATGTCGCTA AGTTAGGGAA AGCTATTGAG CTGGAAAAAC TAGAGGGGTA CCTTGGCACT
TATAAAGGTC AGAAAGTATT GCTACAAAAC GTCGATGTTG TGAAGATGGA TTATTTCCGA
CGAGACCGTG CAGAGGCCGC TATGTTGCGA AGCCAATTCC GCTCTGTTCG GACTAAATTT
GTTAAATCTA TAGCAAATAA TCCCGACGTT GCTAAGCGCT TTACTTTAGA GCAAATAGAC
GGCTTGTCTA ATGGCATTAC ACCTAGCGGC TGGGTTGTGC ATCACAAACT ACCCTTAGAC
GACAGCGGAA CTAATGCGTT AGATAATCTA GTGCTTATCA AAGACAGCCC AGAGCATACT
GTTCTGACTA ATGCGCAAAA GAAAATCACT AACGGATTGC CACACGAGGC TTCGAAAGAA
GTGCTTTGGC CGATTCCTCA AGGTCTTGTT TACCCATAG
 
Protein sequence
MRTHYSVMDL GERYGARFST LEEMAPCFGI DANVFIQAWL EGRLPLYIYF GNESRPCTIR 
GCVSAKVHEH VMHDILYGRD FYQSKASPDN DVLMFVPETP LVCKTKFRGD YRLSTGTHAN
VEKGTHGHVN NRYPIGVSAR GRIADGAVGT LEGLGTLMGP SAQEYMAGAF NPEQAAINKV
RQQNQQAAGK AIYDNTKGAV TDAYQRNGLA GAAAMVVTAS VAELAGTKGL GTVEKVGTLG
DVAKLGKAIE LEKLEGYLGT YKGQKVLLQN VDVVKMDYFR RDRAEAAMLR SQFRSVRTKF
VKSIANNPDV AKRFTLEQID GLSNGITPSG WVVHHKLPLD DSGTNALDNL VLIKDSPEHT
VLTNAQKKIT NGLPHEASKE VLWPIPQGLV YP