Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0596 |
Symbol | |
ID | 6088228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 662092 |
End bp | 663141 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641595658 |
Product | multidrug resistance protein MdtN |
Protein accession | YP_001719352 |
Protein GI | 170022847 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.789434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC AACAAGGGAG TGGTCGTAAG CGACAACTGG CGTTAATTGT CGCCGGGGTC ATCATTATTG CCGCCGCGAT TTCAGGGTGG CTTTCAGTGC GGCAGACCAC ACTGAACCCG CTGTCTGAGG ATGCGGAGTT GGGGGCGAGT GTAGTGCATA TTGCCAGCTC GGTTCCTGGC CGTATCATTT CGATCAATGT CGAGGAAAAT AGCAAAGTCC GGCGTGGTGA CTTACTGTTT TCCATTGAGC CAGATCTCTA CCGTCTGCAA GTCGAACAAG CGCAGGCTGA GTTGAAAATG GCAGAGGCTG CCCACGATAC CCAACAACGG ACAGTGGTTG CGGAACGATC CAACGCCGCG ATCACCAATG AGCAGATTGT ACGGGCGCAA GCCAATCTCA AATTGGCCAC TCAGACATTG GCGCGGTTAC AACCTTTGCG CCCTAAAGGC TATGTCACCG CCCAGCAGGT AGATGATGCA GCAACAGCGA AACACGATGC GGAAGTGAGT CTTAAACAGG CATTAAAACA GTCAGTGGCC GCTGAAGCCT TGGTCAGCAG CACGGCGTCT TCTGAAGCGC TGGTGGTAGC GCGCCGTGCA GCCCTTGCCA TTGCCGAACG GGAACTGGCT AATACGCAAA TACACGCGCC TAATGATGGT CGGGTCGTCG GGTTGACTGT TTCCGCAGGG GAATTTGTCG CCCCGGATCA GGCTATTTTC ACCCTTATCA ATACCGAACA TTGGCATGCT TCGGCATTTT TCCGTGAAAC AGAGTTGAAA CATATCAAGG TGGGTGATTG TGCCACCGTG TATGTCATGG CAGATAGGCA GCGGGCGATT CAAGGACGGG TCGAAGGGAT TGGTTGGGGG GTTAGCTCCG AGGATATGCT AAATATTCCG CGCGGCCTGC CTTATGTGCC GAAGTCATTA AACTGGGTGC GTGTTGTTCA GCGTTTCCCG GTGAGGATCA GCCTGGAAAA ACCGCCGGAG GACCTGATGC GTATCGGGGC GACTGCTGTG GTTATCGTGC GAAATGACGA CGGTTGCTGA
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Protein sequence | MNKQQGSGRK RQLALIVAGV IIIAAAISGW LSVRQTTLNP LSEDAELGAS VVHIASSVPG RIISINVEEN SKVRRGDLLF SIEPDLYRLQ VEQAQAELKM AEAAHDTQQR TVVAERSNAA ITNEQIVRAQ ANLKLATQTL ARLQPLRPKG YVTAQQVDDA ATAKHDAEVS LKQALKQSVA AEALVSSTAS SEALVVARRA ALAIAERELA NTQIHAPNDG RVVGLTVSAG EFVAPDQAIF TLINTEHWHA SAFFRETELK HIKVGDCATV YVMADRQRAI QGRVEGIGWG VSSEDMLNIP RGLPYVPKSL NWVRVVQRFP VRISLEKPPE DLMRIGATAV VIVRNDDGC
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