Gene YPK_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0596 
Symbol 
ID6088228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp662092 
End bp663141 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content54% 
IMG OID641595658 
Productmultidrug resistance protein MdtN 
Protein accessionYP_001719352 
Protein GI170022847 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.789434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC AACAAGGGAG TGGTCGTAAG CGACAACTGG CGTTAATTGT CGCCGGGGTC 
ATCATTATTG CCGCCGCGAT TTCAGGGTGG CTTTCAGTGC GGCAGACCAC ACTGAACCCG
CTGTCTGAGG ATGCGGAGTT GGGGGCGAGT GTAGTGCATA TTGCCAGCTC GGTTCCTGGC
CGTATCATTT CGATCAATGT CGAGGAAAAT AGCAAAGTCC GGCGTGGTGA CTTACTGTTT
TCCATTGAGC CAGATCTCTA CCGTCTGCAA GTCGAACAAG CGCAGGCTGA GTTGAAAATG
GCAGAGGCTG CCCACGATAC CCAACAACGG ACAGTGGTTG CGGAACGATC CAACGCCGCG
ATCACCAATG AGCAGATTGT ACGGGCGCAA GCCAATCTCA AATTGGCCAC TCAGACATTG
GCGCGGTTAC AACCTTTGCG CCCTAAAGGC TATGTCACCG CCCAGCAGGT AGATGATGCA
GCAACAGCGA AACACGATGC GGAAGTGAGT CTTAAACAGG CATTAAAACA GTCAGTGGCC
GCTGAAGCCT TGGTCAGCAG CACGGCGTCT TCTGAAGCGC TGGTGGTAGC GCGCCGTGCA
GCCCTTGCCA TTGCCGAACG GGAACTGGCT AATACGCAAA TACACGCGCC TAATGATGGT
CGGGTCGTCG GGTTGACTGT TTCCGCAGGG GAATTTGTCG CCCCGGATCA GGCTATTTTC
ACCCTTATCA ATACCGAACA TTGGCATGCT TCGGCATTTT TCCGTGAAAC AGAGTTGAAA
CATATCAAGG TGGGTGATTG TGCCACCGTG TATGTCATGG CAGATAGGCA GCGGGCGATT
CAAGGACGGG TCGAAGGGAT TGGTTGGGGG GTTAGCTCCG AGGATATGCT AAATATTCCG
CGCGGCCTGC CTTATGTGCC GAAGTCATTA AACTGGGTGC GTGTTGTTCA GCGTTTCCCG
GTGAGGATCA GCCTGGAAAA ACCGCCGGAG GACCTGATGC GTATCGGGGC GACTGCTGTG
GTTATCGTGC GAAATGACGA CGGTTGCTGA
 
Protein sequence
MNKQQGSGRK RQLALIVAGV IIIAAAISGW LSVRQTTLNP LSEDAELGAS VVHIASSVPG 
RIISINVEEN SKVRRGDLLF SIEPDLYRLQ VEQAQAELKM AEAAHDTQQR TVVAERSNAA
ITNEQIVRAQ ANLKLATQTL ARLQPLRPKG YVTAQQVDDA ATAKHDAEVS LKQALKQSVA
AEALVSSTAS SEALVVARRA ALAIAERELA NTQIHAPNDG RVVGLTVSAG EFVAPDQAIF
TLINTEHWHA SAFFRETELK HIKVGDCATV YVMADRQRAI QGRVEGIGWG VSSEDMLNIP
RGLPYVPKSL NWVRVVQRFP VRISLEKPPE DLMRIGATAV VIVRNDDGC