| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0591 |
|---|
| Symbol | |
|---|
| ID | 6090925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 655048 |
|---|
| End bp | 655866 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641595653 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001719347 |
|---|
| Protein GI | 170022842 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.684861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCA GCAAAAAAAA TCTGTTGATT TATAGCCTGT TGATCATCAT CAGCCTGATC
GTGCTGTATC CGTTTTTCTT TATGATCATG AATTCGTTTA AAACTGGCTC GGAAATCATC
AATGCCCCTA ACGCTCTGCC GAAGAACTTT TCGTTCAATG GCTATATTCA AGCCTTTTAT
AGCCTGAATT TGGGGCGTAT TTTCCTCAAT ACTCTGTTTA TTTCCGTTAC CGTGACTTTG
GTCAATACGC TACTTTCGGC CATGGTGGCC TACGCCATCG TCAAAATGAA TCTCCCTGGC
CGCGAGTTCT GGATCAAACT CATTCTGACC TCAATGATGG TGCCTGCGGT GCTGTTCACC
ATACCTACCT ACATGATGTT GTACTCATGG GGTTGGGTGA ATACTTTTCA GGCATTGATC
GTGCCCGGCA CCATTAGCGC CTACAACATC TTCTTACTGG TACAGTTTTT AAAACAGGTG
GATAACGCCT ATCTCGAAGC TGCCAGGATC GATGGCGCAG GTGAATTCAC CATTTTTTTC
AAGGTGGTGT TGCCGATGAT CCGGCCTGCT CTTGCCACTG TCGCGATCCT CACATTTATG
GGGTCATGGA ACGACTTTAT GGGGCCGCTG TTGTATGTCC GCGACGATTC ACTGATGACA
TTACAACTGG CGCTGTTCAA GTTTGTTAAC GATATCCCTA CCGATAACCT TGAGCAATTG
TGGGCGATGA CCACCATGAT CGCCGTGCCC GTGGTGCTAG TGTTCTTTTT CCTACAGCGC
AATTTTATCA AGGCGTTCAC CGGTATCGGA GTGAAATGA
|
|---|
| Protein sequence | MRISKKNLLI YSLLIIISLI VLYPFFFMIM NSFKTGSEII NAPNALPKNF SFNGYIQAFY
SLNLGRIFLN TLFISVTVTL VNTLLSAMVA YAIVKMNLPG REFWIKLILT SMMVPAVLFT
IPTYMMLYSW GWVNTFQALI VPGTISAYNI FLLVQFLKQV DNAYLEAARI DGAGEFTIFF
KVVLPMIRPA LATVAILTFM GSWNDFMGPL LYVRDDSLMT LQLALFKFVN DIPTDNLEQL
WAMTTMIAVP VVLVFFFLQR NFIKAFTGIG VK
|
|---|
| |