Gene YPK_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0563 
Symbol 
ID6089759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp619074 
End bp621095 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content53% 
IMG OID641595625 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001719319 
Protein GI170022814 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGCTT ACCCTCACCT GTTCACCCCG CTTGATCTTG GCTTTACCAC ACTGAAAAAT 
CGTATCTTAA TGGGTTCTAT GCATACTGGG TTGGAGGAGT TACCCGATGG CCCGCAACGT
CTGGCGGCAT TTTATGCCGA ACGCGCAGCA GGCGGTGTCG GCCTGATTGT GACTGGCGGT
ATTGCCCCCA ATATGAAAGG GGGGGTGTAT CAGGGCGCAT CGGTACTGAA TGACGCCGCG
CAAATCCCCC ATCACCAGGT GGTGACAGAG GCGGTTCATC AAGCTGGAGG GAAAATCGCG
CTACAAATTC TCCATGCGGG GCGTTACAGC TACCAGAAAC ACCCGGTAGC CCCTTCTGCG
TTACAAGCGC CTATCAACCC TTTTGTGCCA CAAGCATTGA GCCATGAAGA GATCCTGCAA
ACTATTGCTG ATTTCGCCCA CTGTGCGCAA TTAGCCAAGC AAGCCGGTTA CGACGGTGTC
GAAATCATGG GTTCCGAAGG TTATCTGATC AACCAGTTTC TCACCGCCCG TACTAATCAG
CGCGATGATG AATGGGGCGG TGATTTTACG CACCGAATGC GTTTTGCCGT AGAAATCGTG
CGCGCCGTCC GTCAGGCCAC GGGACACGAC TTTATTCTAA TTTACCGTTT ATCCATGCTT
GATCTGGTGG AGGAAGGCTC CAACTGGGTA GAAATCGAGC AATTGGCACA GGCCGTTGAA
CAAGCAGGGG CAACGGTGAT CAATACCGGT ATCGGCTGGC ATGAAGCCCG TATTCCCACC
ATCGCCACAA TGGTGCCACG GGCCGGATTC AGTTGGGTGA CCCGCAAGTT GATGGGGAAA
GTGAATATCC CGCTGATCAC CACTAACCGA ATTAATGACC CCGCCGTCGC AGAACAAGTG
CTGGCCGATG GCTGTGCAGA TATGGTGTCA ATGGCTCGGC CATTCCTGGC TGATGCCGCT
TTTGTACAAA AAGCGGCACA GGGCCGGGCC GATGAAATTA ACACCTGTAT TGGTTGTAAT
CAGGCCTGCC TGGACCAGAT TTTTGACGGC AAACTGACCT CATGTTTGGT CAATCCCCGT
GCTTGCCGCG AAACCGAAAT GCCCGAATTA CCCACAGACG CACCAAAACG GTTAGCGGTA
GTCGGTGCCG GGCCTGCGGG GTTGGCTTTT GCGGTAACCG CCGCCCGTCG CGGCCATCAG
GTGACATTAT TTGATGCTGC CGCAGAGATC GGCGGCCAAT TTAATATTGC CAAACAGATC
CCCGGCAAAG AGGAATTTTA CGAAACCCTG CGCTATTTCC GCCGTCAATT AGTGCTGAAC
GGCGTCACCC TACAATTGAA TACCCTGGTG CAGGTAAAGC AGTTGGCTGA GTTTGATGAA
GTGATCCTCG CCTGTGGTAT TCAACCACGC TTACCCTGTA TCAACGGGAT TGATCACCCG
AAAGTACTTA CCTATCTGGA CGTCTTACGC GATAAAAAAC CAGTCGGCCA ACGTGTGGCG
ATTATCGGTG CCGGTGGGAT TGGTTTTGAT ACTGCGGAAT ATCTCAGCCA GTCTGGTGAT
AGTCCCCGTT TCGATAGCAC AGCCTTCAGT ACCGAATGGG GTATTGATCA AGATTTAGCT
CATCGGGGGG GCCTATCACC CGCGGGGGCT AAAGTCCCTC CATCCCCACG GCAGATTTTC
CTGTTACAAC GTAAAGCCAG CAAAGTCGGT GAAGGGCTGG GTAAAACCAC CGGTTGGATC
CACCGCACCA GCTTGGCGAT GCGCGGCGTC AAGATGCTTA ACAGCGTCAG CTACGAGGCC
ATTGATGATA AAGGGTTACA TATCATTCGT GCAGAACAAG CCTGTTGTTT ACCTGTCGAT
ACCATTATTA TTTGTGCCGG ACAGGAGCCA CGACGGGAGC TTCATCAGCC CTTACTGGAT
ATGGGAAAAA CAGTCTATTT GATTGGTGGT GCAGATAAGG CTGTTGAGCT GGATGCCCGC
CGTGCCATTG ATCAGGGTAC CCGCCTAGCG CTAGCCATTT AG
 
Protein sequence
MLAYPHLFTP LDLGFTTLKN RILMGSMHTG LEELPDGPQR LAAFYAERAA GGVGLIVTGG 
IAPNMKGGVY QGASVLNDAA QIPHHQVVTE AVHQAGGKIA LQILHAGRYS YQKHPVAPSA
LQAPINPFVP QALSHEEILQ TIADFAHCAQ LAKQAGYDGV EIMGSEGYLI NQFLTARTNQ
RDDEWGGDFT HRMRFAVEIV RAVRQATGHD FILIYRLSML DLVEEGSNWV EIEQLAQAVE
QAGATVINTG IGWHEARIPT IATMVPRAGF SWVTRKLMGK VNIPLITTNR INDPAVAEQV
LADGCADMVS MARPFLADAA FVQKAAQGRA DEINTCIGCN QACLDQIFDG KLTSCLVNPR
ACRETEMPEL PTDAPKRLAV VGAGPAGLAF AVTAARRGHQ VTLFDAAAEI GGQFNIAKQI
PGKEEFYETL RYFRRQLVLN GVTLQLNTLV QVKQLAEFDE VILACGIQPR LPCINGIDHP
KVLTYLDVLR DKKPVGQRVA IIGAGGIGFD TAEYLSQSGD SPRFDSTAFS TEWGIDQDLA
HRGGLSPAGA KVPPSPRQIF LLQRKASKVG EGLGKTTGWI HRTSLAMRGV KMLNSVSYEA
IDDKGLHIIR AEQACCLPVD TIIICAGQEP RRELHQPLLD MGKTVYLIGG ADKAVELDAR
RAIDQGTRLA LAI