| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0559 |
|---|
| Symbol | |
|---|
| ID | 6089845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 612340 |
|---|
| End bp | 613335 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641595621 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001719315 |
|---|
| Protein GI | 170022810 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGCT TCGCTGTTAT TGGCACCAAT TGGATCACCG CACGCTTTGT CGATGCTGCC
CACGAAAGTG GCAAAATGAA ACTGGTAGCC GTTTACTCCC GCAAGCTGGA CCAGGCTCAG
ACTTTTGGCG ATGATTATCA CGTCACTGAC TGTTTTGATA ATTTGGAAGC CTTAGCCGCA
AGTGATTTGA TTGATGCGGT GTATATCGCC AGCCCGAATG CCTTGCATTA TTCTCAAGCC
AAACTCTTCC TTAGCCATAA AAAGCACGTT ATTTGCGAAA AGTCGCTAGC ATCGAATCTG
GCAGAGGTAG AGTCTCTGAT CGCTTGCGCC CACCAGCATC AGGTGGTGCT CTTTGAGGCC
TTTAAAACGG CTTATCTCCC CAACTTTATA CAACTACAGC AAGCGCTACC GCGTGTGGGG
AAATTACGTA AAGCCTTTAT TAACTTCTGC CAATATTCCT CTCGTTATCA GCGCTATTTG
AACGGCGAAA ATCCCAATAC CTTTAATCCC GCTTTTTCTA ATGGTTCAAT CATGGATATT
GGCTATTACT GTCTGGCCAG CGCCCTGGCG TTATGGGGAG AACCCAAATC GGTGTGGGCA
AGCGCAAGTT TACTCCCAAG CGGTGTCGAT GCTCACGGTA CGGTCAGTCT GAATTACGGT
GATTTTGATG TCATTATCAT CCACTCAAAA GTCAGCCAAT CGGATATTCC CAGTGAAATT
CAGGGAGAAG ATGGCTCGTT AGTCATTGAA AGTATTTCTG AATGCTTATC CGTGGCCTTC
ACGCCAAGAG GAAGCCATTC ACAAGACCTG ACGCAACCAC AGCATATTAA TACCATGCTG
TATGAAGCAG AGGCCTTTGC CCGTTTGGTG GAGAATAATC GGGTGGATCA CGATGGCTTA
CACCTGTCAT TACTGACGTC ACGCATTCAA ACAGAAATCC GCCGCCAGAC GGGTGTTATA
TTCCCGGCAG ATACTCAATA CCCCGCCGCG AGTTAA
|
|---|
| Protein sequence | MIRFAVIGTN WITARFVDAA HESGKMKLVA VYSRKLDQAQ TFGDDYHVTD CFDNLEALAA
SDLIDAVYIA SPNALHYSQA KLFLSHKKHV ICEKSLASNL AEVESLIACA HQHQVVLFEA
FKTAYLPNFI QLQQALPRVG KLRKAFINFC QYSSRYQRYL NGENPNTFNP AFSNGSIMDI
GYYCLASALA LWGEPKSVWA SASLLPSGVD AHGTVSLNYG DFDVIIIHSK VSQSDIPSEI
QGEDGSLVIE SISECLSVAF TPRGSHSQDL TQPQHINTML YEAEAFARLV ENNRVDHDGL
HLSLLTSRIQ TEIRRQTGVI FPADTQYPAA S
|
|---|
| |