| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0540 |
|---|
| Symbol | |
|---|
| ID | 6090657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 592987 |
|---|
| End bp | 593886 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641595602 |
|---|
| Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
|---|
| Protein accession | YP_001719296 |
|---|
| Protein GI | 170022791 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0313] Predicted methyltransferases |
|---|
| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAC ACGATCGAGC AGTAATTTCT GCATCTACGC TTTATGTGGT ACCTACCCCA
ATCGGTAATT TAGGGGATAT TACCCACCGG GCGTTAGAGG TACTGAAAGG CGTTGATTTG
ATTGCGGCTG AAGATACACG CCATACGGGG TTGTTGTTAC AGCATTTTGC GATCAACGCC
CGCCTGTTTG CACTTCATGA CCATAACGAA CAACAAAAAG CTGATCAGTT GCTGGCTAAA
CTGCAAGAAG GCCAGAGTAT TGCGCTGGTA TCCGATGCAG GTACGCCACT GATTAACGAT
CCGGGCTACC ATTTAGTGCG CCGTTGCCGT GAAGCTGGCA TCAGAGTTGT GCCCTTGCCG
GGCGCTTGCG CGGCGATTAC CGCACTCTCT GCCGCAGGCC TTGCCTCAGA TCGTTTTTGC
TACGAAGGCT TCCTGCCAGC AAAAACCAAA GGACGTAAGG ATACTCTGCA AGCGTTGATT
GAGGAACCTC GAACACTGAT CTTCTATGAA TCAACGCATC GCTTATTAGA AAGCTTACAG
GATATGGTAA CCGTACTTGG CCCACAACGC TATGTTGTAC TGGCCAGAGA GCTGACCAAA
ACCTGGGAAT CTATTCACGG AGCGCCAGTC GGTGAATTGC TGGCTTGGGT TAAGGAAGAA
GAGACCCGTC GCCGCGGTGA GATGGTTTTG ATTGTCGAGG GGCATAAAGT ACAGTCCGAT
GATGCATTAC CAGCCGATGC ACTGCGCACA CTGGCCTTAC TGCAAAAAGA GTTACCGCTG
AAAAAAGCCG CCGCATTAGC GGCAGAAATT CATGGAGTCA AAAAGAATGC GCTCTATAAA
TATGCTTTAG AACAGCAACA AGGCGACGTA GAAACAGAAG AGGATGACAT TCAGCAGTAA
|
|---|
| Protein sequence | MNQHDRAVIS ASTLYVVPTP IGNLGDITHR ALEVLKGVDL IAAEDTRHTG LLLQHFAINA
RLFALHDHNE QQKADQLLAK LQEGQSIALV SDAGTPLIND PGYHLVRRCR EAGIRVVPLP
GACAAITALS AAGLASDRFC YEGFLPAKTK GRKDTLQALI EEPRTLIFYE STHRLLESLQ
DMVTVLGPQR YVVLARELTK TWESIHGAPV GELLAWVKEE ETRRRGEMVL IVEGHKVQSD
DALPADALRT LALLQKELPL KKAAALAAEI HGVKKNALYK YALEQQQGDV ETEEDDIQQ
|
|---|
| |