Gene YPK_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0538 
Symbol 
ID6091121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp590499 
End bp590852 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content55% 
IMG OID641595600 
Producthypothetical protein 
Protein accessionYP_001719294 
Protein GI170022789 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.670141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAC GGGATACTGG CGCACATTAC GAAAACCTGG CTCGTCGCCA TCTGGAGCGA 
GCAGGTCTCG TTTTTCAAGC GGCCAATGTT GCCTTCCGTG GAGGCGAAAT TGACCTTATT
ATGCGTGATG GGGATGCATG GGTATTCGTC GAGGTTCGCT TTCGGCGCAA TGACCTGTTT
GGTGGTGCAG CCGCCAGTAT CACCCCGCGC AAGCAACAAC GGCTACATCT GGCCGCCGCT
GTTTGGCTGG CACAACGCGG CGCCAGTTTT GCCACAACAT CCTGTCGTTT TGATGTAGTG
GCGATAACCG GTAACCAGTT AGAATGGCTA CCCAACGCTT TCAATACGGA TTGA
 
Protein sequence
MSQRDTGAHY ENLARRHLER AGLVFQAANV AFRGGEIDLI MRDGDAWVFV EVRFRRNDLF 
GGAAASITPR KQQRLHLAAA VWLAQRGASF ATTSCRFDVV AITGNQLEWL PNAFNTD