Gene YPK_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0527 
Symbol 
ID6089665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp575224 
End bp575739 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content51% 
IMG OID641595589 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_001719283 
Protein GI170022778 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.261361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATGT CGGATATGTC TCCGCGCCGC CCTTACTTGT TGCGCGCATT TTATGAGTGG 
TTGATTGATA ATCAACTTAC TCCACATCTG GTTGTGGATG TTACCCGTCC TGGTGTTTCA
GTGCCGATGG AGTTTGCCCG TGATGGGCAG ATTGTATTGA ATGTGGCACC GCGTGCGGTG
GGTAATTTGG AACTGAGCAA TGATGATGTC CGTTTCAATG CTCGTTTCGG TGGTGTTCCT
CGTCAGGTTA CCGTTCCTAT TGCTGCGGTA ATGGCGATTT ATGCGCGCGA AAATGGCTCA
GGTACGATGT TTGAGCCAGA AGCGGCTTAT GATGCTGATG CTGATGGTAA TTTTGAGGGC
ATCGAAGGAA AAGAGAACGA GACAGCACCG ACTGAGAGCT TGATGTTGGT AACAGATGAT
ACCCGCGTTG AGCAGGATGA TGACAATTCA CCGGATGATA AGCCGCCGCA ACCGCCACGG
AGTGGTGGCC GCCCGGCATT ACGCGTGGTT AAGTAA
 
Protein sequence
MEMSDMSPRR PYLLRAFYEW LIDNQLTPHL VVDVTRPGVS VPMEFARDGQ IVLNVAPRAV 
GNLELSNDDV RFNARFGGVP RQVTVPIAAV MAIYARENGS GTMFEPEAAY DADADGNFEG
IEGKENETAP TESLMLVTDD TRVEQDDDNS PDDKPPQPPR SGGRPALRVV K