Gene YPK_0524 details

Gene Information

• Locus tag: YPK_0524
• Symbol: rplM
• ID: 6088986
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 573368
• End bp: 573796
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641595586
• Product: 50S ribosomal protein L13
• Protein accession: YP_001719280
• Protein GI: 170022775
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000026356
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACTT TCACAGCTAA ACCAGAAACT GTAAAACGCG ACTGGTATGT TGTTGACGCG 
AGCGGTAAGA CTTTAGGTCG CCTCGCTACT GAACTGGCTC GTCGCCTGCG CGGCAAGCAT 
AAAGCGGAAT ACACCCCGCA CGTTGATACT GGTGATTACA TCATCGTTCT GAACGCAGAA 
AAAGTTGCTG TAACCGGCAA CAAGCGTACA GACAAGATTT ATTACCATCA CACCGGTTTC 
GTCGGTGGTA TCAAACAAGC GACCTTTGAA GAGATGATTG CCCGCCGTCC TGAGCGTGTG 
ATTGAAATCG CGGTTAAAGG CATGCTGCCG AAGGGCCCGT TGGGTCGTGC AATGTACCGT 
AAGCTTAAAG TTTACGCGGG TACTGAGCAC AATCATGCGG CACAGCAACC GCAAGTTCTG 
GACATTTAA 

 

Protein sequence

MKTFTAKPET VKRDWYVVDA SGKTLGRLAT ELARRLRGKH KAEYTPHVDT GDYIIVLNAE 
KVAVTGNKRT DKIYYHHTGF VGGIKQATFE EMIARRPERV IEIAVKGMLP KGPLGRAMYR 
KLKVYAGTEH NHAAQQPQVL DI