| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0520 |
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| Symbol | |
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| ID | 6087737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 569655 |
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| End bp | 571028 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641595582 |
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| Product | protease Do |
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| Protein accession | YP_001719276 |
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| Protein GI | 170022771 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0469168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA CATCATTACT TCTTAGTGCG CTAGCAATAA GCGTCGGCTT AGGTCTCGCT
TCTGTTCCTA TGGTGAGTGC AGCAGCACTG CCTGCGGCGG TCGCCGGACA AACGTTACCT
AGCCTGGCAC CAATGCTGGA AAAAGTATTA CCCGCCGTTG TCAGTGTTCA TGTCTCTGGG
AGCCAGGCAC AGCAACAACG CTTGCCAGAA GAGTTTAAAT TCTTCTTTGG CCCGAATGCA
CCATCAGGAA AAGAGAGCAG CCGGCCATTC GAAGGCTTAG GATCAGGCGT TATTATTAAC
GCTGAGAAGG GCTACATCCT GACCAACAAT CACGTCATCA ATAATGCCGA TAAAATTCGT
GTTCAGTTGA ATGATGGTCG TGAATACGAT GCAAAATTGT TGGGTCGTGA TGAACAAACC
GACATCGCTT TACTGCAATT AACGGATGCT AAAAATCTGA CTGCGATCAA AATTGCAGAT
TCCGATAACC TGCGGGTGGG GGATTTTGCT GTCGCCGTAG GTAACCCGTT TGGTCTAGGG
CAAACCGCGA CGTCAGGTAT TATTTCAGCA CTGGGTCGTA GTGGCTTGAA TCTGGAAGGG
CTGGAAAACT TTATCCAGAC CGATGCCTCA ATCAACCGTG GTAATTCTGG CGGTGCTCTG
GTGAATCTGG ATGGGGAACT GATCGGAATT AATACCGCCA TCCTTGCGCC AGGTGGCGGT
AATATCGGTA TCGGCTTCGC TATCCCAAGT AACATGGCAC AAAACCTCAG CCAGCAGTTG
ATCGAGTTTG GCGAAGTGAA ACGTGGGCTG CTCGGTATCC GTGGTAGTGA GATGACGGCT
GACATTGCGA AAGCCTTTAA TATTGATGCT CAGCGTGGGG CTTTTGTCAG TGAAGTGCTG
CCAAAATCAG CGGCAGCGAA AGCCGGGATC AAACCAGGTG ATGTGTTGAT TTCCGTTGAT
GGGAAAAAGA TTAGCAGCTT TGCTGAATTG CGCGCCAAAG TCGGGACAAC GGGGCCAGGC
AAAACCATTA AAATTGGTTT ACTGCGCGAA GGGAAACCAC TGGAAGTATC GGTGACGCTG
GATAACAGTA GCTCAACATC CACCAGCGCT GAAAATTTAT CGCCATCATT ACAGGGCGCA
TCCCTGAGTA ACGGTGAGCT CAAAGACGGT AGTAAGGGGA TCAAAGTTGA TAGCGTCACT
AAAGGTTCGC CAGCCGCACA ATCTGGCTTA CAAAAAGATG ATGTGATTAT TGCCGTAAAC
CGCGAACGGG TTAAGGATAT TGCTGAGTTG CGTAAAGCCA TCGAAGCCAA ACCTGCCGTG
ATTGCACTGA ATATCGTGCG TGGTGAAGAT AATATTTACT TATTAATCCG CTAA
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| Protein sequence | MKKTSLLLSA LAISVGLGLA SVPMVSAAAL PAAVAGQTLP SLAPMLEKVL PAVVSVHVSG
SQAQQQRLPE EFKFFFGPNA PSGKESSRPF EGLGSGVIIN AEKGYILTNN HVINNADKIR
VQLNDGREYD AKLLGRDEQT DIALLQLTDA KNLTAIKIAD SDNLRVGDFA VAVGNPFGLG
QTATSGIISA LGRSGLNLEG LENFIQTDAS INRGNSGGAL VNLDGELIGI NTAILAPGGG
NIGIGFAIPS NMAQNLSQQL IEFGEVKRGL LGIRGSEMTA DIAKAFNIDA QRGAFVSEVL
PKSAAAKAGI KPGDVLISVD GKKISSFAEL RAKVGTTGPG KTIKIGLLRE GKPLEVSVTL
DNSSSTSTSA ENLSPSLQGA SLSNGELKDG SKGIKVDSVT KGSPAAQSGL QKDDVIIAVN
RERVKDIAEL RKAIEAKPAV IALNIVRGED NIYLLIR
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