| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0519 |
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| Symbol | |
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| ID | 6087099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 568477 |
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| End bp | 569628 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641595581 |
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| Product | serine endoprotease |
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| Protein accession | YP_001719275 |
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| Protein GI | 170022770 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTGTC CGCCTAACTC ATGCTATTCT CCTTTTCACC CATTCATTTA TGCCTTAAAC
CTCATGTTTC TTAAGCTATT GCGTTCTATT ATTTTGGGGC TAATTGTTGC CGGTATTCTG
CTGGTTGCCC TACCCATGCT CCGCAGCCCA GGTTATTTAT TCTCTGGAAA AAGCAATAAC
GTAAATGAAG AGGTTCCTAC CAGTTATAAC CAAGCAGTAC GTCGTGCCGC ACCGGCGGTG
GTCAATGTCT ATAACCGGAG CCTGAGCGCT ACACAGCAGG GGTTAGCCAT CCGTACGCTG
GGCTCGGGTG TGATCATGAG CGATAAGGGC TATATCCTTA CCAATAAACA CGTTATCAAT
GATGCAGAAC AGATCATTGT CGCCATGCAA AATGGCCGTA TCTCAGAAGC TTTATTGGTC
GGTTCAGATA ATCTGACAGA TTTAGCCGTC CTAAAGATTG ACGCAACAAA CCTGCCGGTG
ATCCCCATTA ATATTAACCG CACACCACAT ATTGGTGACG TCGTGTTGGC AATTGGTAAC
CCTTATAACC TTGGGCAGAC AGTAACGCAG GGGATTATCA GTGCAACCGG GCGTATTGGT
TTAAGCTCTT CCGGGCGGCA AAATTTCCTG CAAACAGATG CATCAATTAA TCAGGGTAAT
TCCGGCGGTG CGCTGGTCAA CACCCTTGGC GAGCTAATGG GGATCAACAC GCTCTCATTT
GATAAAAGCA ATAATGGCGA AACACCGGAA GGCATCGGCT TTGCGATCCC AACAGCACTG
GCAACGAAAG TGATGGAAAA ACTGATCCGT GATGGGCGGG TGATCCGTGG TTATATCGGT
ATTACCGGCG AGGAGTACCC ACCGTTTAAT GCTAACGATA ATGGCTCAGA TCGGGTACAC
GGTATTAAGG TCAAAAAAGT TTCACCAGAC GGCCCAGCGG CCCAGGCAGG AATACACGTT
GGCGATATCA TTCTTAACGT GAATAATAAA CCGGCAACCT CCGTGATCGA AACTATGGAT
CAGGTCGCAG AAGTCCGCCC TGGTACGACC ATTCCTGTTT TACTATTACG TAATGGTCAG
CAGATAGCGG TTCAAATCAC CATCACTGAA CTCGATCAGA ATGAGATGCT GACCACCCAA
GCAGCAGATT AA
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| Protein sequence | MLCPPNSCYS PFHPFIYALN LMFLKLLRSI ILGLIVAGIL LVALPMLRSP GYLFSGKSNN
VNEEVPTSYN QAVRRAAPAV VNVYNRSLSA TQQGLAIRTL GSGVIMSDKG YILTNKHVIN
DAEQIIVAMQ NGRISEALLV GSDNLTDLAV LKIDATNLPV IPININRTPH IGDVVLAIGN
PYNLGQTVTQ GIISATGRIG LSSSGRQNFL QTDASINQGN SGGALVNTLG ELMGINTLSF
DKSNNGETPE GIGFAIPTAL ATKVMEKLIR DGRVIRGYIG ITGEEYPPFN ANDNGSDRVH
GIKVKKVSPD GPAAQAGIHV GDIILNVNNK PATSVIETMD QVAEVRPGTT IPVLLLRNGQ
QIAVQITITE LDQNEMLTTQ AAD
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