Gene YPK_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0515 
Symbol 
ID6090531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp565518 
End bp566141 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content48% 
IMG OID641595577 
Producttoluene tolerance family protein 
Protein accessionYP_001719271 
Protein GI170022766 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.200554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAC GTCTATTCAT GGTCGCATTG TTGGCCATAG CACCACTGGT TCATGCTGTC 
GATCAAAGCA ACCCTTATCG TCTGATGGAT GAGGCAGCGA AGAAAACCTT TACGCGTCTG
AAAAATGAGC AGCCTAAGAT TAAGCAAAAT CCAGATTATC TCCGCACCAT TGTACGCGAA
GAGCTGTTGC CGTTTGTTCA GATCAAATAC GCCGGCGCGT TAGTACTGGG TAGCTATTAT
AAAGATGCTA CACCTGCACA GCGTGAAGCG TATTTCAATG CATTCGGTAA ATATCTGGAG
CAGGCATACG GGCAGGCATT GGCGCTGTAT CACGGCCAAA CTTACGATGT GGCACCAGAC
CAGCCTTTAG GGGATGCCAA CATCGTTGCT ATCCGCGTCA CCATTCTCGA TCCAAGTGGG
CGTCCACCTG TCCGGTTAGA TTTCCAATGG CGTAAAAATA GCCAAACCGG TAACTGGCAG
GCTTATGACA TGATCGCCGA AGGGGTGAGC ATGATTAGCA CCAAACAGAA TGAATGGGCC
TCTATCCTGC GCCAAAAGGG TGTGGATGGT TTGACCCAAC AATTGCTGAG TGCGGCTAAA
CAGCCAATCA CCTTAGATAA ATAG
 
Protein sequence
MFKRLFMVAL LAIAPLVHAV DQSNPYRLMD EAAKKTFTRL KNEQPKIKQN PDYLRTIVRE 
ELLPFVQIKY AGALVLGSYY KDATPAQREA YFNAFGKYLE QAYGQALALY HGQTYDVAPD
QPLGDANIVA IRVTILDPSG RPPVRLDFQW RKNSQTGNWQ AYDMIAEGVS MISTKQNEWA
SILRQKGVDG LTQQLLSAAK QPITLDK