Gene YPK_0514 details

Gene Information

• Locus tag: YPK_0514
• ID: 6088246
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 564948
• End bp: 565505
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641595576
• Product: hypothetical protein
• Protein accession: YP_001719270
• Protein GI: 170022765
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.449918
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAACGA AGAAAAGTGA AGTCTGGGTA GGAATGTTTA TACTGATTGC TATTCTGGCA 
GTCGTATTTC TCTGCCTAAA AGTTGCAGAT ATCAAGTCAG TGGGCAATCA ACCCACTTAC 
CGTATTTACG CGAATTTTGA CAATATTGGC GGCTTAAAAA ACCACTCTCC TGTCAAAATT 
GGTGGCGTAG TTGTGGGGCG GGTGGCGGAA ATCACCTTGG ATACCAAGAA CTACACGCCA 
CGCGTCGCGA TAGATATTCA GCAACGCTAT AACCACATCC CAGATACCAG CTCATTGGCT 
GTACGCACAT CGGGTTTACT GGGCGAACAA TTCCTGGCAC TGAATGTGGG TTTTGAAGAT 
CCGGAAATGG GCACCAGTAT TTTGAAAGAT GGCGGCACCA TTCAAGACAC CAAGTCTGCA 
TTAGTTCTGG AAGATCTGAT CGGCCAGTTC CTGTACAAGA GCAGCGGTGA TAGCCCGGCA 
GTAAGTGAAA CGGCTCCGGC AACTGAAACT GCAGCTCCAC AGGCTGCGGT ACCTTCTCTT 
CCCGCTCAAC ATCCTTAA 

 

Protein sequence

MQTKKSEVWV GMFILIAILA VVFLCLKVAD IKSVGNQPTY RIYANFDNIG GLKNHSPVKI 
GGVVVGRVAE ITLDTKNYTP RVAIDIQQRY NHIPDTSSLA VRTSGLLGEQ FLALNVGFED 
PEMGTSILKD GGTIQDTKSA LVLEDLIGQF LYKSSGDSPA VSETAPATET AAPQAAVPSL 
PAQHP