Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0513 |
Symbol | |
ID | 6089230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 564161 |
End bp | 564943 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595575 |
Product | hypothetical protein |
Protein accession | YP_001719269 |
Protein GI | 170022764 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGTAA AGTCGTTAGC ATCTTTAGGT CGCCGAGGAA TTAATGTTTG CGCCTCATTT GGTCGCGCAG GCTTGATGCT GTTCAATGCC CTTGTCGGGC GGCCTGAACC GCGCAAACAA TGGCCATTAT TAATCAAACA ACTGTACAGC GTTGGGGTTC AATCCCTGTT GATTATCGTG GTCTCCGGTT TGTTCATCGG TATGGTTCTG GGTTTACAGG GCTTTTTGAT CCTCACCACG TACAGCGCAG AGGCCAGCCT CGGCATGATG GTTTCTTTAT CACTGCTGCG TGAATTGGGG CCTGTGGTCA CTGCGTTACT GTTTGCGGGG CGAGCTGGTT CTGCCCTGAC CGCAGAAATT GGCCTAATGA AAGCCACTGA ACAGATCTCA AGTCTGGAAA TGATGGCTAT CGACCCTTTA CGGCGAGTGG TTGCGCCTCG CTTCTGGGCC GGTCTGATCA GTATGCCATT GCTGACAGCT ATTTTTGTTG CTGTGGGTAT TTGGGGCGGT TCAGTGGTTG GCGTTGATTG GAAAGGGATC GACAGTGGTT TCTTCTGGTC AGCGATGCAA AATGCGGTGG AGTGGCGTAC AGATTTACTG AATTGCCTGA TTAAGAGTCT GGTATTTGCT CTTACCGTGA CCTGGATTGC GCTGTTCAAT GGTTATGATG CGGTCCCAAC GTCTGAAGGG ATTAGCCGGG CAACGACACG TACTGTAGTG CATTCGTCAC TGGCGGTATT GGGATTGGAT TTTGTGCTGA CAGCACTGAT GTTTGGGAAC TGA
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Protein sequence | MLVKSLASLG RRGINVCASF GRAGLMLFNA LVGRPEPRKQ WPLLIKQLYS VGVQSLLIIV VSGLFIGMVL GLQGFLILTT YSAEASLGMM VSLSLLRELG PVVTALLFAG RAGSALTAEI GLMKATEQIS SLEMMAIDPL RRVVAPRFWA GLISMPLLTA IFVAVGIWGG SVVGVDWKGI DSGFFWSAMQ NAVEWRTDLL NCLIKSLVFA LTVTWIALFN GYDAVPTSEG ISRATTRTVV HSSLAVLGLD FVLTALMFGN
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