| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0511 |
|---|
| Symbol | |
|---|
| ID | 6090777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 561886 |
|---|
| End bp | 562860 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641595573 |
|---|
| Product | putative calcium/sodium:proton antiporter |
|---|
| Protein accession | YP_001719267 |
|---|
| Protein GI | 170022762 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCTTG CGATAACACT ATTAATCATT GGCTTGGTTT TATTAGTGTA TGGCGCTGAT
CGATTAGTTT ACGGTGCCGC AGTGTTATCC CGTTCTTTTG GGGTCCCCCC TCTCATTATC
GGGATGACCA TCGTCGGTAT TGGTACATCG CTACCGGAAC TCATTGTTTC AGTTACAGCG
GCATTGAATG GCCAAACGGA TATGGCGGTG GGTAATGTGC TCGGCTCCAA TATTACCAAC
CTATTGCTGA TTGTAGGAGG GGCGGCACTT ATTCGCCCGC TGATTGTACG CTCAGAGATT
CTGCGGCGGG AGTTGCCACT GATGCTCGTG GTCACGGCGT TATGTGGTTT TCTGCTGGCA
GATAACCACC TCAGCCGCGG AGATGGTGTC ATCTTGCTCT TGGCTGCTGC CGCTTTTATT
GTTCTGATGC TCAAAATCGC ACGCCTGGCT CATGCGGAAG GGAATGATAT CTTAACCCGT
GAACAACTAT CTGAATTACC ACAAGATAGT AGCACTACCG TGGCGTTGTT GTGGCTCGTA
TTAGCCTTCA TTATTTTACC GCTCTCCGCC AAGATGATTA TCGATAATGC GACGGTCATT
GCCCGGGTGG CCGGTGTCAG CGAGTTGGTC ATTGGGCTGA CAGTGATCGC TATCGGCACC
AGTTTGCCTG AACTGGCTAC CTTCATCGCC GGTGCGTTGA AAGGTGAAAA TGATATCGCT
GTCGGTAATA TCATCGGCTC CAACATTTTT AATATTGTGA TTGTACTCGG TGTGCCAGCC
CTGCTGTCGC CCGGTGAGAT CAATCCCGAG GCTTTCCAGC GTGATTATTG GGTGATGCTC
GCGGTCAGTG TGGTGTTCAC CCTTCTTTGC CTGGGCCGTA AACATCGAAT CGGTCATCTG
GCAGGCGCTC TGTTATTATG TGGGTTTATC ACTTATCTTG CGGTGTTGTT TTTTGCTCCC
ATAAGTGCGC TGTAA
|
|---|
| Protein sequence | MFLAITLLII GLVLLVYGAD RLVYGAAVLS RSFGVPPLII GMTIVGIGTS LPELIVSVTA
ALNGQTDMAV GNVLGSNITN LLLIVGGAAL IRPLIVRSEI LRRELPLMLV VTALCGFLLA
DNHLSRGDGV ILLLAAAAFI VLMLKIARLA HAEGNDILTR EQLSELPQDS STTVALLWLV
LAFIILPLSA KMIIDNATVI ARVAGVSELV IGLTVIAIGT SLPELATFIA GALKGENDIA
VGNIIGSNIF NIVIVLGVPA LLSPGEINPE AFQRDYWVML AVSVVFTLLC LGRKHRIGHL
AGALLLCGFI TYLAVLFFAP ISAL
|
|---|
| |