Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0509 |
Symbol | |
ID | 6088230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 559676 |
End bp | 560239 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641595571 |
Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
Protein accession | YP_001719265 |
Protein GI | 170022760 |
COG category | [R] General function prediction only |
COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA CCGCATATAT AGACACATGC TACGGGCCAG TGGCCGATGA CGTAATACAA CGTGCAGCAA ACATTCGTCT ACTGATTTGT GATGTCGACG GTGTTATGTC CGATGGCCTG ATTTATATGG GCAATCAAGG CGAAGAGCTG AAAGCGTTCA ACGTGCGTGA TGGCTATGGT ATCCGCTGCC TGATAACCTC AGACATTGAC GTCGCTATCA TTACTGGCCG CCGGGCAAAA TTACTGGAAG ACCGTGCCAA CACCTTAGGC ATTACCCACC TTTATCAAGG ACAATCTGAT AAGCTGGTGG CCTACCACGA ATTATTAGCT ACCTTACAGT GTCAACCCGA GCAGGTCGCT TATATTGGTG ATGACTTGAT TGATTGGCCC GTAATGGCGC AAGTTGGGTT ATCTGTTGCG GTGGCAGATG CCCATCCGTT ACTGTTACCC AAGGCGCATT ATGTGACTCG AATCAAGGGG GGCCGGGGGG CGGTACGTGA AGTATGTGAT TTGATATTAT TGGCCCAAGA CAAGCTCGAA GGGGCCACAG GATTATCAAT ATGA
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Protein sequence | MSNTAYIDTC YGPVADDVIQ RAANIRLLIC DVDGVMSDGL IYMGNQGEEL KAFNVRDGYG IRCLITSDID VAIITGRRAK LLEDRANTLG ITHLYQGQSD KLVAYHELLA TLQCQPEQVA YIGDDLIDWP VMAQVGLSVA VADAHPLLLP KAHYVTRIKG GRGAVREVCD LILLAQDKLE GATGLSI
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