Gene YPK_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0508 
Symbol 
ID6087482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp559116 
End bp559679 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content46% 
IMG OID641595570 
Producthypothetical protein 
Protein accessionYP_001719264 
Protein GI170022759 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA CAAGACGCTG GATAACACTG GTACTGGCAC TGATTGCGTT AGCCTTGATT 
GGCTGGAATA TGTCAGGTTT TAATCAACAA GGTGCGCCAG TAGTGGCTGA TGATAATGAG
CCATCGTCGC AAAGCCAGCA TACGGTAACG ACTGTTTTTA ATCCGGTCGG TCAACTGAAT
TACAAGTTAG TCGCCGAAGA GGTTCAGAAT TTTAGCGCGA AGGAACTGAC TTGGTTTACC
AAACCGGTCA TGACCCTGTT TGGTGACAAT GCGGTGGCAA CTTGGACAGT GCGCGCTGAT
CGCGCCAAGC TGACTGATGA TAAAATGCTT TATCTGTATG GTCATGTTGA GGTTGATAGC
CTGACCGCCG ATGCGCAGTT AAAAAAAATT CGAACGGATA ACGCCCAAGT GAATCTAATT
ACCCAAGATG TCGCCTCAGA CGATGAAGTG ACCCTTTTCG GTATTGGATT TACCTCTGAA
GGCATGAGAA TGCGTGGGAA CTTGCGGGAC AAAACCGCTG AGCTGATTGA AAAGGTTAAA
ACCTCTTATG AAATCCAAAA ATAA
 
Protein sequence
MSKTRRWITL VLALIALALI GWNMSGFNQQ GAPVVADDNE PSSQSQHTVT TVFNPVGQLN 
YKLVAEEVQN FSAKELTWFT KPVMTLFGDN AVATWTVRAD RAKLTDDKML YLYGHVEVDS
LTADAQLKKI RTDNAQVNLI TQDVASDDEV TLFGIGFTSE GMRMRGNLRD KTAELIEKVK
TSYEIQK