Gene YPK_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0501 
Symbol 
ID6090559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp554019 
End bp554291 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content49% 
IMG OID641595563 
Productphosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 
Protein accessionYP_001719257 
Protein GI170022752 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTCA AACAAACCGT TGAGATCAAA AACAAGCTGG GAATGCACGC CAGACCCGCG 
ATGAAATTGT TCGAGCTGGT TCAGAGTTTT GATGCAGAAG TGATGTTACG CAATGACAGC
GGTACCGAAG CGGAGGCCAG CAGCGTCATT GCGCTGCTGA TGCTGGATTC AGCCAAAGGC
CGCCAAATAG AGGTTGAAGC AACCGGGGTT GATGAAATTC AGGCATTGGC AGCGGTTATC
GAGTTGTTTA ATTCGGGATT TGACGAAGAT TAA
 
Protein sequence
MTVKQTVEIK NKLGMHARPA MKLFELVQSF DAEVMLRNDS GTEAEASSVI ALLMLDSAKG 
RQIEVEATGV DEIQALAAVI ELFNSGFDED