| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0473 |
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| Symbol | |
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| ID | 6089980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 518371 |
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| End bp | 521229 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641595535 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_001719229 |
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| Protein GI | 170022724 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0589964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAATA CGTCACCCAC TGATCTGTGC GCCAACACCC CCACTCTCAC CATCCACGAT
AACCGGGGGT TAGCTATTCG CACACTGGCT TATAACCGCC GCAGTCATAA TGAAACCGTT
GACGAACTGA TCAGCCGCAA CCGCTATAAC GCCTCCGGTC AGCTAATCGC CAGCCGCGAC
CCGCGCCTTG AGGTGGATAA TTTCCGCTAT CAATACAGCC TCAGCGGTGT TCCACTGCGT
ACCGACAGCG TCGATAGCGG CAGTACGCTG CAACTGGCAG ATAGTGCTGG CCGCACGGTG
CTCACGCGGG ATGCACACCA CACCCGCCGC TGGGTAGAGT ATGAGACCGG TGAGCACAGT
TTAGGCCGCC CGCTAAGTTA CCGCGAGCAA GCCAAAGGCG GCCTGAAAAC GGTTACTGAC
CGCTTTTTCT ATGGCGAAAA TAGCGAGCAG GATAAAGGCT GCAATCTGAA CGGCCAGTGT
GTCCGCCATT ACGACAGCGC CGGTTTACAG GCACTGATTA GCCAGTCAAT TATTGATGTG
CCGCTGCAAC AGCAGCGCCG TCTACTGACG GAGACTAAAG GCCCGGTTGA CTGGTTTGGC
GAGAAGGAGA ACTGGGGCGC TCGCCTGAGT GAATCGCCGT TTGTTAGCCA TTGCACCACC
AATGCTCTCG GCCAGTTAAT CACGCAAACC GATGCCAAAG GCCATATCCA GCGCATGGCC
TATAACCGTG CCGGACAACT TATCGGTTCG TGGCTAACGG TAAAAAATGG CGTGGAGCAG
CCCATTGTAT ACTCACTCAC CTATTCGGCT GCCGGGCAAA AACTGCGCGA AGAGAGCGGC
AACGGGGTCA TTACCGAATA CCGTTATGAA CCCCAGACTC AGCGCTTAAT CGGCATTAAA
ACCACCCGCC CGGCGAAGAA AGACCGCCCG ACCCGGTTAC AAGACCTGCG TTACGATTAT
GACCCGGTCG GGAATATTCT CGCCATCCAT AATGACGCCG AAGCCACCCG CTTCTACCGT
AATCAGAAAA TCGTGCCGGA AACCACTTAC CGCTACGATG CACTGTACCA GCTTATCGAG
GCCACTGGCC GTGAAGCCGA TACCAACGGC ATACAAAACA GCCAGTTGCC CACGCTGGCG
TCACTGAACG ACAGCAACCA GTTCGTCAAT TACACCCGCC ACTACCACTA TGACCGCGCC
GGTAACCTGC TAAAAATTCA GCACACAGGA GCCAGCCAAT ACAGTACCTA TATCACGGTG
TCCGATTCGT CCAATCATGG CATTCAGCAA CAAGATGGCA TCACCGCCCA TGATGTCCGC
TCCCAGTTTG ATACGGCGGG TAATCAGCGA CAACTGCAAC CCGGTCAACT CCTTCACTGG
AACAGCCGCA ATCAGTTACA GCAAGTGGAG CCCGTGCCCC GCAACGACGG CATCAGTGAC
AGCGAAAACT ATCTCTATGA TGGCAGCGGT AGCCGGGTGG TCAAAATCAG TCTCCATAAA
ACCCATAACG CCATCCAAAC CCGTTCAGTC ATTTATTTAG CGGGACTGGA ACTGCGTAGC
CAATATAATG GCAATAATCT GACAGAAGAT TTTCAGGTGA TGACCGTGGG TGCCGCGGGC
CGTGCTCAGG TACGGGTATT ACACTGGGAG CGCGGCCAAC CCGTTGATAT CGTCAATGAC
CAACTGCGTT ACAGTTTCGA TAATCACCTT GGCTCGGCGT TAATCGAATT AGACAGCGAC
GGTGATATTA TCAGCCAGGA AGAATATTAC CCATTTGGCG GCACCGCGGT GTTAGCCTCC
CGTAATACCG TGGAAGCTAA ATATAAAACC GTTCGTTACT CCGGTAAAGA GCGTGACACC
ACCGGACTGT ATTATTACGG TTACCGTTAT TACCAGCCGT GGCTGGGCCG ATGGTTAAGC
GCCGACCCCG CAGGCACTAT AGACGGGCTG AATTTATACC GAATGGTGAG GAATAACCCA
ATCAGATTGC GCGATAACAA TGGGCTGTTA ACCGAAGAGC AAATTGATAT GTACGTTAAT
TTGCTTAGTA ATATTGGATT AAAAAATGAT GATGAATTAA AGAGTGAACT ATTAAGATAT
GGTTTGAGCG AAGAAGAGCA AGACCAGATA TATTTAAATA TGCCAATGTT TACGCAGTCT
GGGTCATCAA GCTCATCAGC CACGTCCTTT TCTGAGAATA GTTCCAGTTC TGGGAGCACG
CAAAGTGCTG ATTCAGGTTA TCTCAGTCCA GTAAGAAACT ATCATTTTTT TGAAGATATT
AATTTAGTGA CAATGCACCG CCCCTATCCA ACAGAAAAAG TCTCTAGTGA AGAAATAATA
TCTGCTGCTG CAGAGCTAAA AGAAGCTAGC CCTATAGAAA TTCTAATTGG TTTGGATTTG
ACCAGTGAAA ACCTCCATTC ATATAAGTCA GCGCTTGCCG ATGAAGGAAT TGACTATATC
ACTAAAGAAA AATATGAAAT AAAGGATTTT TTTGAAGAAG GAGATTTATC GACTGAACAA
ATAGATCTGA CAGTAAATGA AATATTAACA TTACAAGAAA GTGCTATTGT TGGGGTTCAT
TGTGGCGCAG GTAATGGAAG AAGTGGAATT ATTGCATCAG CATTAGCCAT TAATAAGCTG
TATGCAACAA ATGAAGTAAG TAATTTTGAT GCAACTCATC CATTGGGAGG AACAATGTTT
GGGAACACAG ATACATATCA GGTTGATATT GTAACAGCCA GTGCGGTTGG GATTATCAGA
AAAACAAATC CTCAAGCAGT AGAGCGTAAT GAGGATGTTT CTGCCTTATA TGACTACTCC
TATTTATTAT ATACAAGGCA ACACTCAACA TCATTGTAA
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| Protein sequence | MPNTSPTDLC ANTPTLTIHD NRGLAIRTLA YNRRSHNETV DELISRNRYN ASGQLIASRD
PRLEVDNFRY QYSLSGVPLR TDSVDSGSTL QLADSAGRTV LTRDAHHTRR WVEYETGEHS
LGRPLSYREQ AKGGLKTVTD RFFYGENSEQ DKGCNLNGQC VRHYDSAGLQ ALISQSIIDV
PLQQQRRLLT ETKGPVDWFG EKENWGARLS ESPFVSHCTT NALGQLITQT DAKGHIQRMA
YNRAGQLIGS WLTVKNGVEQ PIVYSLTYSA AGQKLREESG NGVITEYRYE PQTQRLIGIK
TTRPAKKDRP TRLQDLRYDY DPVGNILAIH NDAEATRFYR NQKIVPETTY RYDALYQLIE
ATGREADTNG IQNSQLPTLA SLNDSNQFVN YTRHYHYDRA GNLLKIQHTG ASQYSTYITV
SDSSNHGIQQ QDGITAHDVR SQFDTAGNQR QLQPGQLLHW NSRNQLQQVE PVPRNDGISD
SENYLYDGSG SRVVKISLHK THNAIQTRSV IYLAGLELRS QYNGNNLTED FQVMTVGAAG
RAQVRVLHWE RGQPVDIVND QLRYSFDNHL GSALIELDSD GDIISQEEYY PFGGTAVLAS
RNTVEAKYKT VRYSGKERDT TGLYYYGYRY YQPWLGRWLS ADPAGTIDGL NLYRMVRNNP
IRLRDNNGLL TEEQIDMYVN LLSNIGLKND DELKSELLRY GLSEEEQDQI YLNMPMFTQS
GSSSSSATSF SENSSSSGST QSADSGYLSP VRNYHFFEDI NLVTMHRPYP TEKVSSEEII
SAAAELKEAS PIEILIGLDL TSENLHSYKS ALADEGIDYI TKEKYEIKDF FEEGDLSTEQ
IDLTVNEILT LQESAIVGVH CGAGNGRSGI IASALAINKL YATNEVSNFD ATHPLGGTMF
GNTDTYQVDI VTASAVGIIR KTNPQAVERN EDVSALYDYS YLLYTRQHST SL
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