Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0467 |
Symbol | |
ID | 6090679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 509275 |
End bp | 509763 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641595529 |
Product | rod shape-determining protein MreD |
Protein accession | YP_001719223 |
Protein GI | 170022718 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00113622 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATCGTT ACAGTAGTCA TGGTCGCTGG GTTATCTGGC TATCCTTCCT GATTGCGATG GTGCTGCAAA TTATGCCGTG GCCTGAACAG ATCTATATGT TTCGGCCCTC ATGGTTAGCC TTGGTACTCA TTTATTGGGT GATGGCCTTG CCACACCGGG TGAATGTTGG CACGGGGTTT ATTCTGGGGC TGATTATGGA CCTTATTTTA GGATCGACTC TGGGAGTCCG GGCGTTGGCA TTCAGTATCA TCGCCTATCT GGTGGCCTTT AAGTTTCAGT TATTCCGTAA TATGGCACTG TGGCAACAGG CACTTATCGT CATGCTGCTT TCGCTGACGA TGGATGTTGT GGTGTTTTGG TCTGAGTTCT TGGTGATTAA TGTCGCATTC CGCCCTGAAG TTTTCTGGAG TAGCGTTGTC AACGGCATTC TCTGGCCATG GCTATTCCTG CTAATGCGTA AAATTCGCCG CCAATTTTCG GTGCAATAA
|
Protein sequence | MNRYSSHGRW VIWLSFLIAM VLQIMPWPEQ IYMFRPSWLA LVLIYWVMAL PHRVNVGTGF ILGLIMDLIL GSTLGVRALA FSIIAYLVAF KFQLFRNMAL WQQALIVMLL SLTMDVVVFW SEFLVINVAF RPEVFWSSVV NGILWPWLFL LMRKIRRQFS VQ
|
| |