Gene YPK_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0460 
Symbol 
ID6087120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp500748 
End bp501200 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content48% 
IMG OID641595522 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001719216 
Protein GI170022711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.480459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATA AGTTTCACAT TTTGCTTCTG AATGGCCCTA ACTTGAATCT GCTTGGAACG 
CGTGAACCAG AAAAGTATGG TTACACCACC TTAGCTGAAA TTGTCAGTCA GTTAGAGATT
CAGGCTCAGG GAATGGATGT CGCGCTTTCC CATTTGCAGT CAAATGCAGA ACATGCGCTG
ATCGATAGCA TTCACCAGGC ACGGGGTAAT ACCGATTTTA TCCTGATTAA CCCAGCAGCG
TTTACGCATA CCAGCGTGGC ACTGCGTGAT GCGTTGCTAG GCGTGCAGAT CCCGTTTATC
GAGATCCACT TGTCTAACGT GCATGCCAGG GAGCCTTTCC GTCATCATTC ATATCTCTCC
GATATCGCGG TTGGCGTAAT CTGCGGACTT GGCGCAGATG GCTACAACTT TGCTTTACAG
GCAGCGGTAA ATCGCTTGTC AAAATCCAAC TAG
 
Protein sequence
MSDKFHILLL NGPNLNLLGT REPEKYGYTT LAEIVSQLEI QAQGMDVALS HLQSNAEHAL 
IDSIHQARGN TDFILINPAA FTHTSVALRD ALLGVQIPFI EIHLSNVHAR EPFRHHSYLS
DIAVGVICGL GADGYNFALQ AAVNRLSKSN