Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0460 |
Symbol | |
ID | 6087120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 500748 |
End bp | 501200 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641595522 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_001719216 |
Protein GI | 170022711 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.480459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGATA AGTTTCACAT TTTGCTTCTG AATGGCCCTA ACTTGAATCT GCTTGGAACG CGTGAACCAG AAAAGTATGG TTACACCACC TTAGCTGAAA TTGTCAGTCA GTTAGAGATT CAGGCTCAGG GAATGGATGT CGCGCTTTCC CATTTGCAGT CAAATGCAGA ACATGCGCTG ATCGATAGCA TTCACCAGGC ACGGGGTAAT ACCGATTTTA TCCTGATTAA CCCAGCAGCG TTTACGCATA CCAGCGTGGC ACTGCGTGAT GCGTTGCTAG GCGTGCAGAT CCCGTTTATC GAGATCCACT TGTCTAACGT GCATGCCAGG GAGCCTTTCC GTCATCATTC ATATCTCTCC GATATCGCGG TTGGCGTAAT CTGCGGACTT GGCGCAGATG GCTACAACTT TGCTTTACAG GCAGCGGTAA ATCGCTTGTC AAAATCCAAC TAG
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Protein sequence | MSDKFHILLL NGPNLNLLGT REPEKYGYTT LAEIVSQLEI QAQGMDVALS HLQSNAEHAL IDSIHQARGN TDFILINPAA FTHTSVALRD ALLGVQIPFI EIHLSNVHAR EPFRHHSYLS DIAVGVICGL GADGYNFALQ AAVNRLSKSN
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