Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0455 |
Symbol | panF |
ID | 6089871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 495597 |
End bp | 497051 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641595517 |
Product | sodium/panthothenate symporter |
Protein accession | YP_001719211 |
Protein GI | 170022706 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4145] Na+/panthothenate symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02119] sodium/pantothenate symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACTG ATGTCGTTCT GCCGTTAGTC GGCTATCTGG TGTTGGTCTT TGGCTTATCT ATTTATGCTT ATACGCGCCG CCAAACCGGG AATTTTCTCA ACGAATATTT TATCGGCAAC CGTTCGATGG GCGGTTTTGT ATTGGCGATG ACCCTGACCG CCACCTATAT CAGCGCCAGC TCGTTTATTG GTGGACCAGG TGCCGCTTAT AAATACGGCC TTGGCTGGGT CTTACTGGCG ATGATCCAAT TGCCTGCGGT CTGGCTTTCC CTCGGTGTCT TAGGCAAAAA GTTTGCCATT CTGGCGCGTC GCTATAATGC CGTGACCCTC AACGATATGT TGTATGCCCG TTATCAGAGC CGTTTACTGG TTTGGCTGGC CAGTATCAGC CTGCTGGTGG CTTTTGTCGG TGCCATGACC GTGCAATTTA TTGGTGGCGC ACGGTTGTTA GAAACGGCGG CGGGGATCCC TTACGACACT GGCTTATTGA TTTTTGGTAT CAGTATCGCC CTGTACACCT CGTTTGGTGG CTTCCGGGCC AGTGTCTTGA ATGATGCCCT GCAAGGGTTA GTGATGCTGA TCGGCACCAT TTTACTGTTA GTCGCGGTGA TCCACGCGGC AGGTGGCCTA CACAAAGCCG TCGAAACGCT GCAACATATC GATCCGGCGC TGGTTTCCCC CCAAGGCGGC GATCAGATCC TCGACGTGCC ATTTATGGCT TCGTTCTGGA TCCTGGTCTG TTTTGGGGTG ATTGGTCTGC CACACACCGC CGTACGTTGT ATTTCGTATC GTGACAGTAA AGCGGTTCAT CGCGGTATTA TCCTCGGCAC CATCGTGGTG GCGATCCTAA TGTTCGGTAT GCACCTGGCT GGCGCACTGG GGCGGGCAGT GTTACCAGAT CTGAAAATTC CAGATCAAGT AATCCCGACA CTGATGATCA CCGTACTGCC GCCATTTGCT GCGGGGATAT TCCTGGCAGC ACCGATGGCG GCGATCATGT CGACCATCAA TGCCCAGTTA CTGCAATCTT CTGCTACCAT CGTGAAGGAT TTGTATCTCA ATCTGTGGCC AGCAGAGTTA AAGAATGAGC GCAAGCTGGC ACGTATCTCC AGCTTATCCA CACTCATTCT TGGGCTATTA TTGCTCTTGG CCGCCTGGCG ACCACCTGAA ATGATTATCT GGTTGAACCT ACTGGCCTTT GGCGGACTGG AAGCGGTATT CCTCTGGCCA TTGGTATTGG GATTATACTG GGAGCGAGCC AATGCCCACG GCGCTCTTAG CGCCATGATC GTCGGTGCGG TATGCTATAC GGTATTAGCC AGCTTCGATA TCAAGATAGC CGGCCTGCAC CCCATTGTGC CGTCACTTAC ACTTAATCTG TTGGCGTTTT ATATCGGTAA TCTGTTTGGC GACAGAGCGC GGGCGCGACA CCCCGCCATC GTCAGTGCCG ATTAA
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Protein sequence | MQTDVVLPLV GYLVLVFGLS IYAYTRRQTG NFLNEYFIGN RSMGGFVLAM TLTATYISAS SFIGGPGAAY KYGLGWVLLA MIQLPAVWLS LGVLGKKFAI LARRYNAVTL NDMLYARYQS RLLVWLASIS LLVAFVGAMT VQFIGGARLL ETAAGIPYDT GLLIFGISIA LYTSFGGFRA SVLNDALQGL VMLIGTILLL VAVIHAAGGL HKAVETLQHI DPALVSPQGG DQILDVPFMA SFWILVCFGV IGLPHTAVRC ISYRDSKAVH RGIILGTIVV AILMFGMHLA GALGRAVLPD LKIPDQVIPT LMITVLPPFA AGIFLAAPMA AIMSTINAQL LQSSATIVKD LYLNLWPAEL KNERKLARIS SLSTLILGLL LLLAAWRPPE MIIWLNLLAF GGLEAVFLWP LVLGLYWERA NAHGALSAMI VGAVCYTVLA SFDIKIAGLH PIVPSLTLNL LAFYIGNLFG DRARARHPAI VSAD
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