Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0447 |
Symbol | |
ID | 6087515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 487710 |
End bp | 488600 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595509 |
Product | 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_001719203 |
Protein GI | 170022698 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAC TACAACGTAT TGGTTTTATT GGTTTGGGGA AGATGGGAAC CCCTATGGTA CAGCGCCTGG TAAAGGCGGG TTTTGAGCTG TATCTCTGTG ATGCAGATAT CACCAAGGTG CAAATACTGA CGGCAGAACT CAACGCTGAA TCACTCACGG TCGATAATGC GGCATCTTTA GATGCCTTGA TCACCATGTT GCCTAACTCT GAGGCCGTTG AACAGGCATT GCTGGGAAGT GACGGGATAT CGGGATGGGT TGCACAGCTA TCTCAAGCGG CAGTGGTGAT CGACATGAGT TCCTCCGATC CCGAACGCTC ACGTCGTCTG GCGATCTTGC TGGCTGTATG GGAACTGGAT TATCTGGATG CCCCGGTCTC TGGCGGGGTA AAAAAAGCCC AAAACGGGAC ATTGTCGATC CTGATTGGGG GCGAGGACCG GGTACTTAAA TCTTGTTATA CCGCTTTGGC TGCGATGGGG GAACAGATCC TGTTTGTTGG CCCTGCGGGG AGTGGTCATG CGGCCAAGGC ATTGAATAAT TATGTCTCAG CGACGGGGCT ATTGGCGACA ATCGAGGCAC TGCATGTTGC CCAACGTTTT GGGATCGAAC CAGAGGTGAT GACCGAGGTG CTCAATACCT CCACTGGCCG GAGTAATACG TCAGAAAACA AAGTGCGCCA ATTTATGCTG AACGGTTCGT ATGCCTCTGG TTTTACGCTG CAATTGATGA ATAAAGACCT GCATATCGCA CGTAATTTGG CACAACGGCT TAATTACCCA ATGAGATTGG GCATGCACTG TGTCGATGTT TGGGATGAAG TTTCGCGGCG TGCAACACCG ATGGCAGACC ATACCGAGAT GTACCGGCTG TTGATCGACA AGGAGCCATA G
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Protein sequence | MKQLQRIGFI GLGKMGTPMV QRLVKAGFEL YLCDADITKV QILTAELNAE SLTVDNAASL DALITMLPNS EAVEQALLGS DGISGWVAQL SQAAVVIDMS SSDPERSRRL AILLAVWELD YLDAPVSGGV KKAQNGTLSI LIGGEDRVLK SCYTALAAMG EQILFVGPAG SGHAAKALNN YVSATGLLAT IEALHVAQRF GIEPEVMTEV LNTSTGRSNT SENKVRQFML NGSYASGFTL QLMNKDLHIA RNLAQRLNYP MRLGMHCVDV WDEVSRRATP MADHTEMYRL LIDKEP
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