Gene YPK_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0445 
Symbol 
ID6087239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp485890 
End bp486357 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content54% 
IMG OID641595507 
Product17 kDa surface antigen 
Protein accessionYP_001719201 
Protein GI170022696 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGC TGGCCATTGC CGTTGCACTT GCCGCCACCG TATTAAGCGG ATGTGCCAAT 
AACACTGCGT CTGGTGATAC TTTTACTGCC TCTCAGGCAC GACAAGTACA GACCGTCACT
TACGGCTCGA TAGTGTCTGC CCACCCGGTC ACCATTCAGG GCGGCAATAA TAATAATGTT
GCCGGTGCCA TTGGCGGTGC CGTAGTGGGT GGATTCTTAG GGAATACTAT TGGCGGTGGC
CGTGGTAATA GCTTGGCAAC TGCAGGTGGT GCCGTTGCTG GTGGCGTAGC AGGCCAGGGT
ATCCAGAGTG CGATGAACCG CAGTGAAGGG GTTCAACTGG AAATTCGCCG TGATGATGGC
AGCAATATTG TTGTTGTACA GGCTCAGGGG CCTACCCGTT TCAGTGCTGG CCAACGCGTG
ATAATCGCCA GTGATCGTAG CGGTACCGTC ACGGTTTCTC CTCGCTAA
 
Protein sequence
MNKLAIAVAL AATVLSGCAN NTASGDTFTA SQARQVQTVT YGSIVSAHPV TIQGGNNNNV 
AGAIGGAVVG GFLGNTIGGG RGNSLATAGG AVAGGVAGQG IQSAMNRSEG VQLEIRRDDG
SNIVVVQAQG PTRFSAGQRV IIASDRSGTV TVSPR