Gene YPK_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0438 
Symbol 
ID6090966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp481190 
End bp482536 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content47% 
IMG OID641595500 
Producthypothetical protein 
Protein accessionYP_001719194 
Protein GI170022689 
COG category[S] Function unknown 
COG ID[COG4222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATGA GCAAATTCCG GTTGGTGCTG CTGGCCAGTA GCATCGCATT CAGTACTTCG 
TCGTGGGCAC AAGCCGTTGA GGTACCCGCG GTTCTGGCCG GACATGCGGT TCTGCCGGTG
AAATCGACGG TTGCAACACC TTCTGATGCT CCAACTGATT TACAACAAAG CGGAAAATAT
ACCAGCGGCC AACGCGTTAG CGCATTGGGT TCTGTGGCCG CTAAATCTGC CGACCGTCTG
ACGGGCATTG GATTACCGAT TAACGGCCAA CCGCTACAAG GGCACTCGGG AATAAAGCAT
ATGCCAGATG GGACTTATTG GGTGCTAACC GATAATGGAT TTGGCAGCAA AGCTAACTCA
CCTGATGCCA TGCTTTATCT CAATCACTAT AATATTGATT TCAAAAATGG CAATGTGACC
CCACTGCAAA CCGTGTTTCT GCACGATCCA GATAAAAAAG TGCCGTTTCA TATCATTAAT
GAAAGTACTG AAAAACGTTA TCTGACCGGC AGTGATTTTG ATCCCGAAAG CTTCCAGTTT
GCCGATGATG CCCTTTGGAT TGGTGATGAA TTCGGGCCTT ATTTGATTAA AGCCGATTTG
AACGGAAAAG TGCTGGCGGT ATTTGAGACT CAGGTTGATG GCAACGTCGT GAAATCACCC
GATAATCCGA CGCTTACACT GCCGGGTGCT CCTGATGGTA AACAGAATTT TCAGGTAGCG
CGCTCAAAAG GATTTGAAGG GATGGCGGTT TCGCCCGATG GCAGCAAGTT GTACCCCATG
TTAGAAGGGG CGCTGTGGGA TGGTGAAAAA TTTGAGAATA TCGATGGCAA ACGCTACCTG
AGAGTGTTGG AGTTTGATGT TAAAAATCAG GCATGGACAG GGCGCAGTTG GCAATATGTG
TTGGAAGATA ACCAGAATGC CATTGGCGAT TTTAATCTGA TTGATGCAAA CCATGGATTA
GTCATTGAAC GCGACAACGG CGAGGGCACG GCAGATAAAG CCTGTGCGGC AGGGGCGCCA
ACGGATAAGT GCTTTAGCCA GATAGCTAAG TTTAAACGTG TCTACAAAAT AGCTTTCTCT
GATGACAATG TCGGCAAACC AGAAGAAAAA GTGTCATATA TTGATTTGCT CAATATTAAA
GACCCGCAGA ACTTGGCACG TAAACCTTTA AACAACGGCG TACTGACATT CCCGTTCTTT
ACCATTGAGA ATGTTGATGT AGTGGATGCC AGTCATATCA TTGTCGGTAA CGATAATAAC
TTCCCATTCT CCTCCAGCCG CCAGCCTAAT GAGGCGGACG ATAATGAATT TATCTTACTG
GATGTGAAAG CGTTATTGAG TCAGTAA
 
Protein sequence
MHMSKFRLVL LASSIAFSTS SWAQAVEVPA VLAGHAVLPV KSTVATPSDA PTDLQQSGKY 
TSGQRVSALG SVAAKSADRL TGIGLPINGQ PLQGHSGIKH MPDGTYWVLT DNGFGSKANS
PDAMLYLNHY NIDFKNGNVT PLQTVFLHDP DKKVPFHIIN ESTEKRYLTG SDFDPESFQF
ADDALWIGDE FGPYLIKADL NGKVLAVFET QVDGNVVKSP DNPTLTLPGA PDGKQNFQVA
RSKGFEGMAV SPDGSKLYPM LEGALWDGEK FENIDGKRYL RVLEFDVKNQ AWTGRSWQYV
LEDNQNAIGD FNLIDANHGL VIERDNGEGT ADKACAAGAP TDKCFSQIAK FKRVYKIAFS
DDNVGKPEEK VSYIDLLNIK DPQNLARKPL NNGVLTFPFF TIENVDVVDA SHIIVGNDNN
FPFSSSRQPN EADDNEFILL DVKALLSQ