| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0393 |
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| Symbol | |
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| ID | 6089750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 426971 |
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| End bp | 428317 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641595457 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001719151 |
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| Protein GI | 170022646 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACCA AAAATCGAGT GATTTGGCGC GAAGGGCTGT TCATCAAACC GCAACATTTT
CAACAACAGC AACGGCATAA CGACTACCAG TTACAACGCC GGATTATCGC TCTGCAAGGG
TATAGCTATG GTTTCAGTTC ACTGATCCTG AATCAGGAGT TATTGAAATT AGGGCGTATT
GGCTTGACGG TCGCCAGTGG CAATATGGCT GATGGCACGG TGTTTGATAT CCCTTATCAA
GACTATTCAC CAAAGCCATT GGATGTACTG AATTGTAATG ATGCGGCCAG CCGTGACATT
TATCTGGCAT TACCGATGCT AAACGATGCC ATTAATGAGG TGGCAGGCCA GCAGGGGCAA
GCGCCGGGAA CCCTTCGCTA TCGTGAACAC AGCGATGATG TCCGCGATTT ACATACCGAA
GGGGGCGATG TCAGCCAGTT GGTACTGGCA CAACTGGCAC CGCGTTTGAT GCAAGGCTCG
GAAGACCTCA GCGCATACTC GGTCCTGCCG CTGTGTCGGG TCAAAGAGAA ACGGCCTGAC
GGTTCGCTGA TCTTGGATGA AGAGTTCATT CCCACCTGCA CCACGCTCAG TGTCTCCACG
CAGTTAAAAG GCTTTATGGA TGAAGTCGAA GGGACATTGG TTGAACGCGC CCAACTACTG
GCGAAACGTA TTGGTTCTCC CGGTCAGCAG GGGATCGCGG ATGTGGCTGA ATTTATGATG
TTGCAGGTCT TTAACCGGAC ACAGCCGCTC TTTACCCATT TGGCACATCA GGCGATTCTG
CATCCAGAAG CGTTTTACCA TCAGTTGGTA CAAACCTGCG GTGAACTGCG CACGTTTACC
GATGAATCTC GCTTAGCGGG CACCTTCCCG GTTTATAACC ACGATAATTT GACCGACAGT
TTTCAGCCGT TGTTTTTGGC GATGCGTCAG GCATTAAGCA CCGTGCTCAC ACCGCGTGCC
ATCTCTATCC AGTTGCATAT GCAGGCACAC GGTATTCGCG TTGCGACCAT TAATGATAGT
GATCTATTGC GCAGTGCTGA TTTTGTGCTG GCGGTTCGGG CGCAAATACC TCAAGAACAA
TTGCGTCGGC AGTTTGTTCA GCAAACCAAA ATCACCTCAC TTGAGAAAAT ACGCGATTTG
GTCAGTGTCC AACTGCCCGG CGTCCCGTTG GTGGCACTGT CCGCCGCACC GCGCCAGCTC
CCTTACCACT CGGGATACAC CTACTTCATG CTGGATCTGC AAAGCCCTGT ATGGAAAGAA
ATCCAGCAAA GCAATGCGAT TGCCTTCCAC GTCTCGGGTG ATTTCCCTGA TCTGGACATG
CAATTCTGGG CAATCAGGAG CAGCTAA
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| Protein sequence | MPTKNRVIWR EGLFIKPQHF QQQQRHNDYQ LQRRIIALQG YSYGFSSLIL NQELLKLGRI
GLTVASGNMA DGTVFDIPYQ DYSPKPLDVL NCNDAASRDI YLALPMLNDA INEVAGQQGQ
APGTLRYREH SDDVRDLHTE GGDVSQLVLA QLAPRLMQGS EDLSAYSVLP LCRVKEKRPD
GSLILDEEFI PTCTTLSVST QLKGFMDEVE GTLVERAQLL AKRIGSPGQQ GIADVAEFMM
LQVFNRTQPL FTHLAHQAIL HPEAFYHQLV QTCGELRTFT DESRLAGTFP VYNHDNLTDS
FQPLFLAMRQ ALSTVLTPRA ISIQLHMQAH GIRVATINDS DLLRSADFVL AVRAQIPQEQ
LRRQFVQQTK ITSLEKIRDL VSVQLPGVPL VALSAAPRQL PYHSGYTYFM LDLQSPVWKE
IQQSNAIAFH VSGDFPDLDM QFWAIRSS
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