| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0390 |
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| Symbol | |
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| ID | 6091161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 423911 |
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| End bp | 424981 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641595454 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001719148 |
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| Protein GI | 170022643 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGTA CAGACAGGTC AACATGCACT GATGTAAGTG TGGTTGAGGA TGTAAGTGGG
GTTGAGGCAA GACCCGAAGG GCAGGCATTG GATGTTTCAC GTTATAACTT TTTTCAATTG
GTCGAATTGC TCAACCAATT GGCGGTAGCG TGGCAAGGTG CGGCCCCTGT GGCGACCCCA
GCCAATGAAG CCATCCGTTT TAAATCGACC GCCAGTTTAG CATTCCCGAC CAGAGATGTG
ATCGCACTGG ACACCTCCGC CCGAGGTCAA TTTGAGCTAG AGGTCTCTTT CCTTGGATTG
CATGGCAGCC AATCGCCGCT ACCAGGATAT TACCTCGATT CGTTAGCGTG GGAGGATGCG
CAGAATGAGA ACCGGTTGAC GGATTTCATG AACGTATTCA ATCACCGCCT GTTAACGCTA
CTGCATCAGA TTTGGCGTAA ATACCGTTAC TACATCTGCT TTGACAATGG CGGTGATGAT
GCATTTTCAC AACGCATGTT CTCGCTGGTG GGGTTAGGTA GCGAGGTCGT CCGCAATAAA
TTGCAGATCA ATCACAGCAA AATGCTGGCT TATGCAGGGC TGCTGGCTAG CCCCGGCAGA
GCACCTGAAG TAATTTGCAG CCTTGTCTCA CATTGCTTCA ATTTGCCAGA TATCACCTTA
CACAGTTGGC AGCTACGCAA GGTGGATATT GCCCCCTCAC AGCAGAATCG CTTGGGGATG
AGGGTGAAAG TCCGTGGCAA GAAATATGAT GAAAAGTCAG TGCTTGGCGT TAATTTCTCC
ATCGGTTCAC GGGTTGCGGA TCGTAGCGGG AAATTTTTGT TGTGCATCAA TAAGCTGACG
CGAGAACAGT TCTTATCCTT TTTACCCAAC GGGGCTAATT ACGCCTCGTT AGTGATGTTT
GTCGCCTTCA TTATGCGCGA TCAATTCGCG TGGGATTTAC GTCTTGGGTT GGCCGAGCAA
CAGGTGGGCG GGATGGTTCT GGGAACCGAG CAAAATAGCC TCTTGGGCTG GACCAGTATC
CTCGGCGATC CCGAACAGAA ACCCAGCGTA ACGATTGGTG TAATGGAATA A
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| Protein sequence | MAGTDRSTCT DVSVVEDVSG VEARPEGQAL DVSRYNFFQL VELLNQLAVA WQGAAPVATP
ANEAIRFKST ASLAFPTRDV IALDTSARGQ FELEVSFLGL HGSQSPLPGY YLDSLAWEDA
QNENRLTDFM NVFNHRLLTL LHQIWRKYRY YICFDNGGDD AFSQRMFSLV GLGSEVVRNK
LQINHSKMLA YAGLLASPGR APEVICSLVS HCFNLPDITL HSWQLRKVDI APSQQNRLGM
RVKVRGKKYD EKSVLGVNFS IGSRVADRSG KFLLCINKLT REQFLSFLPN GANYASLVMF
VAFIMRDQFA WDLRLGLAEQ QVGGMVLGTE QNSLLGWTSI LGDPEQKPSV TIGVME
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