Gene YPK_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0380 
Symbol 
ID6091213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp414088 
End bp415197 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content53% 
IMG OID641595444 
Productmaltose/maltodextrin transporter ATP-binding protein 
Protein accessionYP_001719138 
Protein GI170022633 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATG TAACGCTGAG CAGCGTTTAT AAGGCCTTTG GTGAGGCTGT GATTTCCAGA 
GACATCAACC TGGAGATCGA TGACGGTGAG TTTGTGGTGT TTGTTGGCCC ATCAGGTTGC
GGGAAATCGA CGCTGCTACG GATGATTGCC GGTCTTGAGG ACATTACCTC GGGTGAATTG
TTGATTGGTG GCAAACGCAT GAATGAAGTG CCGCCCTCTG AGCGCGGCAT TGGCATGGTG
TTTCAATCCT ATGCACTTTA TCCCCACTTG TCAGTGGCAG AAAACATGTC CTTCGGCCTG
AAATTGGCGG GGGTAAAGAA AGCAGAAATT TACCAGCGGG TGAATCAGGT CGCAGAGGTG
CTGCAACTGG CTCACTTGTT GGACCGACGG CCAAAAGCCT TATCCGGTGG TCAGCGTCAG
CGGGTGGCGA TTGGTCGTAC CTTGGTCTCC GAGCCAGATG TTTTCCTGTT GGATGAACCG
CTTTCCAACC TGGATGCCGC ATTGCGGGTG CAGATGCGAA TCGAGATTTC TCGTCTGCAT
AAGCGCTTGG AACGCACCAT GATCTACGTC ACCCATGACC AAGTGGAAGC CATGACGCTG
GCCGACAAAA TTGTGGTGTT GGACGCCGGC AATATCGCTC AGGTCGGTAA GCCGCTGGAG
CTGTATCACT ACCCAGCCAA CCGCTTTGTC GCGGGCTTTA TCGGCTCGCC AAAAATGAAT
TTCTTACCGG TTAAAGTCAC GGCCGCTGAA CCTCGTCAAG TACAGATCGA ACTCCCTAAC
CATCAGCGGG TATGGCTGCC GGTAGAAGGC GATCAGGTTC AGGTCGGCGC CAATATGTCT
TTGGGGATCC GCCCAGAACA TCTGCTGCCA AGTAGCGCCT CTGAAGTCAC GTTGGAAGGC
GAGATTCAGG TGGTAGAGCA GTTGGGTAAT GAGACTCAAA TTCATATCCA AATCCCAGCA
ATACGCCAGA ACCTGGTCTA CCGCCAGAAC GACGTGGTGT TGGTAGAAGA AGGTGCAACA
TTCTCCATCG GTCTGCCACC GCATCGGTGT CACCTCTTCC GTGAGGATGG CACTGCATGT
AAGCGGCTGT ACCAAGAACT GGGCGTCTAG
 
Protein sequence
MANVTLSSVY KAFGEAVISR DINLEIDDGE FVVFVGPSGC GKSTLLRMIA GLEDITSGEL 
LIGGKRMNEV PPSERGIGMV FQSYALYPHL SVAENMSFGL KLAGVKKAEI YQRVNQVAEV
LQLAHLLDRR PKALSGGQRQ RVAIGRTLVS EPDVFLLDEP LSNLDAALRV QMRIEISRLH
KRLERTMIYV THDQVEAMTL ADKIVVLDAG NIAQVGKPLE LYHYPANRFV AGFIGSPKMN
FLPVKVTAAE PRQVQIELPN HQRVWLPVEG DQVQVGANMS LGIRPEHLLP SSASEVTLEG
EIQVVEQLGN ETQIHIQIPA IRQNLVYRQN DVVLVEEGAT FSIGLPPHRC HLFREDGTAC
KRLYQELGV