Gene YPK_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0377 
SymbolmalF 
ID6088765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp410285 
End bp411862 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content49% 
IMG OID641595441 
Productmaltose transporter membrane protein 
Protein accessionYP_001719135 
Protein GI170022630 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTAT CCCACACCGA GCTTCAAAGC CGAAAAAAGA AAATCGCCTG GTGGCAGAGT 
GATGCGCTTA AATGGTTGGT TATCAGCCTG TTAAGCCTCT TCACCTGTTA TTTGATCGTG
TTGATGTATG CTCAAGGTGA ATATCTTTTT GCCATCGTGA CGCTGATTTT GGTGAGTTTA
GGGCTGTATG TGTTTGCCAA CCGCCGCGCT TATGCCTGGC GCTATGTTTA CCCCGGCGTG
GCCGGTATGG GGCTGTTTGT TCTCTTCCCC TTAATTTGTA CTATCGCCAT CGCCTTTACT
AACTACAGCA GTACCAACCA ATTAACCTTC GAACGTGCTC AATCCGTCTT GCTGGATCGG
CAGTTCCAGA CCGGTAAAAC ATTTACCTTT GGTCTCTATC CCAGTGATAA CCAATGGCGT
TTACAGCTTA CCAACCCAGA CGACGGTAGC CTGTTCATCT CTGAACCCTT CAGTTTTGAG
GCCACGGGTG AGCAAAAAGT GATGGTCGCC CCAACCAATA CGGCACAAAC GAGTGAACCG
GCATCACTGC GGATTATTAC CCAGAGTCGT CAGGCGCTAA GTGGCTTAGT GGCTATCCTG
CCTGATGGTG CTGAACTGCG TATGAGTTCA TTACGTCAAT TTTCCGGCAC CAAGCCGCTC
TATACTCTGG GTGCCGATGG TAAAGAACTG ATTAATCAGC AAACCGGCGT GAAATATTGG
CCGAATCCTA ATACCGGGTT CTATCAAGCG GTCAACGCTG ATGGACAGTG GGAAAATGAA
AAGCTTAGCC CCGGCTTTAC CGTATCTATC GGCTGGAAAA ACTTCCTGCG GGTACTGCAC
GACGAAGGGA TTCAAAAGCC GTTCATCTCG ATCTTTATCT GGACTATCCT CTTCTCGGTA
ATGAGCGTGA CCTTTACGGT AGCTGTCGGC ATGGTGCTGG CATGTGTGGT GCAATGGGAT
TCGCTGAAAG GTAAAGCGAT CTATCGGGTG ATGCTGATCC TGCCCTATGC GGTACCGTCG
TTTATCTCTA TTCTGATTTT CAAAGGGTTA TTTAACCAAA GTTTCGGTGA AATCAACCTG
ATGCTCAGCC ATTTATTTGG CATCAAACCC GCCTGGTTCA GTGATCCTAT CACCGCCAAA
AGCATGATTT TAATCGTGAA TACCTGGCTC GGTTATCCCT ACATGATGAT TTTGTGCATG
GGGCTGTTGA AAGCGATCCC TGACGACTTG TATGAGGCAT CGGCAATGGA TGGCGCAGGG
CCATTCCAGA ACTTTTTCCG CATCACGTTT CCGTTACTGA TTAAGCCACT GACACCGCTG
ATGATTGCCA GTTTTGCCTT TAACTTTAAT AACTTCGTGC TAATCCAGCT ATTGACCAAC
GGGGGACCCG ATATGATTGG TACCAGCACC CCAGCGGGGT ATACCGATTT GCTGGTTAAC
TATACCTATC GTGTCGCCTT TGAAGGCGAA GGCGGGCAGG ACTTCGGTTT GGCCGCCGCT
ATCGCAACCC TGATTTTCAT TTTGGTAGGC GCCCTCGCGA TACTGAATTT GAAAGCCAGC
AAAATGAATT TTGACTAA
 
Protein sequence
MQLSHTELQS RKKKIAWWQS DALKWLVISL LSLFTCYLIV LMYAQGEYLF AIVTLILVSL 
GLYVFANRRA YAWRYVYPGV AGMGLFVLFP LICTIAIAFT NYSSTNQLTF ERAQSVLLDR
QFQTGKTFTF GLYPSDNQWR LQLTNPDDGS LFISEPFSFE ATGEQKVMVA PTNTAQTSEP
ASLRIITQSR QALSGLVAIL PDGAELRMSS LRQFSGTKPL YTLGADGKEL INQQTGVKYW
PNPNTGFYQA VNADGQWENE KLSPGFTVSI GWKNFLRVLH DEGIQKPFIS IFIWTILFSV
MSVTFTVAVG MVLACVVQWD SLKGKAIYRV MLILPYAVPS FISILIFKGL FNQSFGEINL
MLSHLFGIKP AWFSDPITAK SMILIVNTWL GYPYMMILCM GLLKAIPDDL YEASAMDGAG
PFQNFFRITF PLLIKPLTPL MIASFAFNFN NFVLIQLLTN GGPDMIGTST PAGYTDLLVN
YTYRVAFEGE GGQDFGLAAA IATLIFILVG ALAILNLKAS KMNFD