| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0368 |
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| Symbol | metH |
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| ID | 6091133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 397784 |
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| End bp | 401479 |
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| Gene Length | 3696 bp |
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| Protein Length | 1231 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641595434 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001719128 |
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| Protein GI | 170022623 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.488667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGGATA CAGTAATCGA TAATAAGGTC AAGGAATTGC ACCAGCAGTT GGCGCAACGC
ATTTTGGTAC TGGATGGTGG TATGGGCACC ATGATCCAGA GCTACCGATT AGAAGAAGCA
GATTACCGAG GCGCGCGTTT TGCTGACTGG GCAAGTGACC TAAAAGGTAA CAATGACCTC
TTGGTGCTCT CCAAGCCAGA AGTCATCACG ACGATCCATA ATGCCTACCT TGAAGCCGGT
GCTGACATTC TCGAAACCAA TACCTTTAAC TCTACCTCCA TTGCGATGGC GGACTATCAG
ATGGCGTCAC TGTCGGCTGA AATTAACTAT GAAGCCGCCC GTCTGGCCCG TATCTGTGCC
GATGAATGGA GCGCCCGCAC GCCAGAAAAA CCACGTTATG TTGCCGGGGT GCTGGGGCCA
ACCAACCGTA CTGCCTCCAT CTCCCCTAAA GTTAATGACC CGGCGTTCCG TAACGTCAGT
TTTGATCAGT TGGTCGAGGC CTATCGTGAG TCTACCCGCG CGCTGATTGA AGGGGGTGTT
GATTTAATTA TGATCGAAAC GGTCTTCGAT ACGTTGAATG CGAAGGCCGC GACCTTTGCG
GTTGAAAGCG AATTCGAAGC GATGGGCGTG CTGTTGCCGG TGATGATTTC CGGCACCATT
ACCGATGCCT CCGGCCGTAC GCTGTCTGGT CAAACGACGG AAGCTTTTTA TAACTCGCTG
CGCCATGTCA AACCGCTGTC GTTTGGTCTG AACTGTGCGC TGGGGCCGGA TGAACTGCGC
CAATATGTTG CTGAGTTATC GCGTATCTCT GAATATTATG TCAGTGCGCA CCCGAATGCC
GGTTTGCCGA ATGCTTTTGG TGAATATGAT CTGGAAGCCA AAGAGATGGC TGAGCAGATT
GGCGAGTGGG CACGTGCCGG ATTTTTGAAT ATTGTCGGCG GTTGCTGCGG TACCACACCC
CGGCATATTG CGGCGATGGT CAACGCTGTC GCTGGGGTGC CTCCGCGCCC GTTGCCTGAT
ATTCCGGTTG CCTGCCGTTT GGCCGGGCTG GAGCCACTGA CTATCGATGC CAATACCCTG
TTTGTGAACG TCGGTGAGCG GACCAACGTC ACGGGTTCGG CACGCTTTAA ACGGCTGATA
AAAGAAGAGA AGTACGGAGA GGCGCTGGAT GTTGCCCGCC AACAGGTCGA AAGCGGCGCG
CAGATCATCG ATATCAACAT GGACGAAGGC ATGTTGGATG CCGAAGCGGC CATGGTGCGT
TTCCTTAATC TGATTGCCGG GGAGCCTGAT ATTGCCAGGG TGCCGATTAT GATCGACTCC
TCAAGGTGGG ATGTGATTGA AAAAGGCCTG AAATGTATTC AAGGCAAAGG CATCGTGAAC
TCCATTTCGA TGAAAGAGGG CGTTGATGCC TTTATTCATC ACGCCAAACT GGTACGCCGT
TATGGTGCCG CCATGGTGGT CATGGCCTTT GATGAAACAG GGCAAGCCGA TACCCGCGCA
CGTAAAATCG AGATTTGCCG CCGTGCGTAT AAAATATTGA CGGAAACCGT CGGTTTCCCA
CCAGAAGATA TTATCTTCGA TCCGAATATT TTTGCCGTAG CGACGGGGAT TGAAGAGCAT
AACAATTATG CCGTCGATTT TATTGAAGCC TGTGCCGATA TCAAAGCCGA GTTGCCTCAC
GCGCTGATTT CTGGCGGTGT CTCCAACGTT TCCTTCTCTT TCCGAGGGAA TGATCCAGTA
CGTGAAGCCA TTCATGCAGT GTTCCTCTAT TACGCTATTC GCAATGGCAT GGATATGGGG
ATTGTTAACG CCGGTCAATT GGCGATTTAT GACGACCTGT CTGATGAATT ACGTGATGCG
GTCGAGGATG TGATCCTCAA CCGCCGTGAT GACAGTACTG AGCGCCTGCT GGATTTAGCA
GAAAAATACC GTGACAGTAA AAGTGGCGAG GTCGCGATCC AGCAAGCAGA ATGGCGTGGT
TGGCCGGTGG TGAAACGGTT GGAGTATTCG CTGGTAAAAG GCATTACTGA ATTTATTGAG
CTGGATACCG AAGAAGCGCG CCAGCAGGCA GATCGGCCAA TTGAAGTGAT TGAAGGGCCG
TTAATGTCTG GGATGAATGT GGTTGGTGAC TTGTTTGGTG AAGGAAAAAT GTTCCTGCCA
CAGGTTGTAA AATCAGCCAG GGTAATGAAA CAGGCGGTGG CCTATCTCGA ACCTTATATT
GAAGCCAGTA AGCAGAAGGG TACCACCGCC GGTAAAATCT TATTAGCAAC CGTCAAAGGC
GATGTGCATG ACATCGGCAA GAACATCGTG GGTGTGGTTT TGCAGTGTAA TAACTATGAA
ATCATCGATC TGGGCGTGAT GGTGCCGACG GAAAAAATTC TGCGCACTGC ACGGGAAGAG
AAGGTGGATA TTATCGGCCT GTCTGGTCTG ATTACCCCGT CGCTGGACGA GATGGTTAAC
GTGGCGAAAG AGATGGAGCG CCAAGGCTTT ACGCTGCCGT TGCTCATTGG TGGCGCAACG
ACATCCAAAG CTCACACCGC GGTCAAGATT GAGCAAAATT ATAGCGGTTC CACCACGTAT
GTCTCTAACG CCTCGCGCAG TGTGGGCGTG GTATCCGCGT TGCTATCGGA TACGCAACGG
GAGGCATTTG TGGCAAAAAC CCGCAAAGAA TATGAGACTG TACGTATCCA ACATGCCCGT
AAAAAACCGC GCACCCCGCC GGTCAGTTTG CAGGCTGCAC GGAATAACCC AACGGTGATT
GATTGGGAGA ACTACACTCC GCCAGTGGCC CATAAATTGG GGGTACAGGT GGTGGAGGCC
AGTATTGAAA CTCTGCGCAA CTATATCGAC TGGACGCCAT TCTTTATGAC CTGGTCGTTG
GCAGGCAAGT ATCCGCGCAT TTTGGAAGAT GAGGTGGTGG GGGAGGAGGC CAAGCGCCTG
CTCGCCGACG CCAATGCTTT GTTGGATAAA CTGTCCGCCG AGGATCTGCT GCATCCAAAA
GGCGTGGTTG GTCTGTTCCC GGCTAACAGC GTCGGCGATG ATATCGAAAT TTACCGTGAT
GAGCGGCGAG ATGAGGTACT GGCCATCAGC TATCATTTAC GCCAACAGAC CGAAAAAACC
GACTTCCCGA ACTACTGTTT AGCTGACTAT GTCGCGCCTA AATCCAGTGG TAAAGCCGAT
TATTTTGGTG CGTTTGCGGT GACCGGTGGC TTGGAAGAGG ACGCGTTGGC CGATGCTTAT
GATGCGCAAC ATGATGACTA CAATAAAATC ATGATTAAGG CATTATCAGA CCGTCTGGCC
GAAGCCTTTG CCGAGTATCT GCATGAGCGA GTACGTAAAG TGTATTGGGG TTTTGCACCG
AACGAAAATC TGAGCAACGA AGAGTTGGTG CGCGAAAATT ATCAGGGGAT CCGCCCGGCA
CCGGGCTATC CCGCTTGCCC GGAGCACACC GAGAAAGGCC AAATTTGGCA GTTGTTGGAT
GTCGAAACCC ACACCGGTAT GAAACTGACC GAATCCTACG CCATGTGGCC GGGGGCTTCG
GTATCGGGTT GGTATTTCAG CCACCCAGAC AGCAAATATT TTGCCATAGC ACAAATTCAG
CGTGATCAGG TTGAGGATTA TGCCGCCCGT AAAGGGATGC CCACTGCCGA AGTTGAACGC
TGGCTAGCCC CTAATCTGGG TTACGATGCG GATTGA
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| Protein sequence | MVDTVIDNKV KELHQQLAQR ILVLDGGMGT MIQSYRLEEA DYRGARFADW ASDLKGNNDL
LVLSKPEVIT TIHNAYLEAG ADILETNTFN STSIAMADYQ MASLSAEINY EAARLARICA
DEWSARTPEK PRYVAGVLGP TNRTASISPK VNDPAFRNVS FDQLVEAYRE STRALIEGGV
DLIMIETVFD TLNAKAATFA VESEFEAMGV LLPVMISGTI TDASGRTLSG QTTEAFYNSL
RHVKPLSFGL NCALGPDELR QYVAELSRIS EYYVSAHPNA GLPNAFGEYD LEAKEMAEQI
GEWARAGFLN IVGGCCGTTP RHIAAMVNAV AGVPPRPLPD IPVACRLAGL EPLTIDANTL
FVNVGERTNV TGSARFKRLI KEEKYGEALD VARQQVESGA QIIDINMDEG MLDAEAAMVR
FLNLIAGEPD IARVPIMIDS SRWDVIEKGL KCIQGKGIVN SISMKEGVDA FIHHAKLVRR
YGAAMVVMAF DETGQADTRA RKIEICRRAY KILTETVGFP PEDIIFDPNI FAVATGIEEH
NNYAVDFIEA CADIKAELPH ALISGGVSNV SFSFRGNDPV REAIHAVFLY YAIRNGMDMG
IVNAGQLAIY DDLSDELRDA VEDVILNRRD DSTERLLDLA EKYRDSKSGE VAIQQAEWRG
WPVVKRLEYS LVKGITEFIE LDTEEARQQA DRPIEVIEGP LMSGMNVVGD LFGEGKMFLP
QVVKSARVMK QAVAYLEPYI EASKQKGTTA GKILLATVKG DVHDIGKNIV GVVLQCNNYE
IIDLGVMVPT EKILRTAREE KVDIIGLSGL ITPSLDEMVN VAKEMERQGF TLPLLIGGAT
TSKAHTAVKI EQNYSGSTTY VSNASRSVGV VSALLSDTQR EAFVAKTRKE YETVRIQHAR
KKPRTPPVSL QAARNNPTVI DWENYTPPVA HKLGVQVVEA SIETLRNYID WTPFFMTWSL
AGKYPRILED EVVGEEAKRL LADANALLDK LSAEDLLHPK GVVGLFPANS VGDDIEIYRD
ERRDEVLAIS YHLRQQTEKT DFPNYCLADY VAPKSSGKAD YFGAFAVTGG LEEDALADAY
DAQHDDYNKI MIKALSDRLA EAFAEYLHER VRKVYWGFAP NENLSNEELV RENYQGIRPA
PGYPACPEHT EKGQIWQLLD VETHTGMKLT ESYAMWPGAS VSGWYFSHPD SKYFAIAQIQ
RDQVEDYAAR KGMPTAEVER WLAPNLGYDA D
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