Gene YPK_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0349 
SymbolnudC 
ID6089054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp375013 
End bp375795 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content51% 
IMG OID641595414 
ProductNADH pyrophosphatase 
Protein accessionYP_001719112 
Protein GI170022607 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.389702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTAC AACTTACAGG TAAAGAAAGT GGCTGGTGGA TTGTCAGTCA TGAAAATAAA 
TTATGGTTGC CGAAGGGAGA GCTACCACAA GGCAATGCCG CTAATTGGTC ACTGCAAGGC
GCGACTGCAC GGCAGATTGG TGAATGGCAA GGGCAGCCTG TGTGGCTTAT TCGCCAGATG
ATGCCTTCAG GGATGGGGTC GGTCCGGCAA TTATTGGATG TTGACCGCGG TTTATTTCAG
TTGGCAGGGC GCGGTGTGCA ATTAGCCGAA TTCTATCGTT CACATCGCTT TTGTGGCTAT
TGTGGGCATG AAATGCATGC CAGCCGGACG GAATGGGCCA GCTTATGTAA CCACTGCCGG
GAGCGCTATT ATCCGCAAAT TGCCCCCTGT GTGATTGTTG CTATTCGCCG TGGTGATGAA
ATTTTGCTGG CACAACATGT GCGCCATCGT GGCGGTATCA ATACCGTGCT GGCGGGGTTT
GTTGAAGTGG GGGAGACCCT GGAACAGGCG GTTTCACGGG AAGTGTTGGA AGAAAGTAAT
ATTCACATTA AGAACCTGCG CTACGTGACG TCACAGCCTT GGCCATTTCC TCATTCACTG
ATGATGGCAT TTATGGCGGA TTATGACAGC GGTGAATTAT GTCATGACCC GAAAGAGTTG
CTGAATGCCG GCTGGTATCG CTATGACCAA TTACCTTTGC TACCTCCACC CGGTACCGTG
GCACGCCGTC TGATTGAAGA TACGGTGGTC TTATGTCGTG AACATAGCGA TTTAAGCCAA
TAG
 
Protein sequence
MELQLTGKES GWWIVSHENK LWLPKGELPQ GNAANWSLQG ATARQIGEWQ GQPVWLIRQM 
MPSGMGSVRQ LLDVDRGLFQ LAGRGVQLAE FYRSHRFCGY CGHEMHASRT EWASLCNHCR
ERYYPQIAPC VIVAIRRGDE ILLAQHVRHR GGINTVLAGF VEVGETLEQA VSREVLEESN
IHIKNLRYVT SQPWPFPHSL MMAFMADYDS GELCHDPKEL LNAGWYRYDQ LPLLPPPGTV
ARRLIEDTVV LCREHSDLSQ