Gene YPK_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0345 
Symbol 
ID6091024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp370539 
End bp371336 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content54% 
IMG OID641595410 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001719108 
Protein GI170022603 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG ACCAGACGCT AAGTGACAGT GAATTTTTAC GCTATAGCCG CCAACTGCTA 
CTGGAAGATA TCGGCCCGGA AGGGCAACGA AAGCTAAAGG GTGCCAGTGT GCTGATTGTT
GGCCTCGGTG GGCTGGGCTC CCCCGCAGCG CTCTATCTGG CCGCCGCCGG TGTCGGTCAG
TTACTGCTGG CAGACGATGA CCAGTTGGAT CTCACTAATT TGCAGCGCCA GATTCTGTAT
CGTACAGCAG ATATCGGCCA AACGTTATCG AACCCCACCT CATCGGTTAG CCACAACAAG
GCCCGGTTAG CGCAACGCCA TTTGCAGCAA CTCAATCCAC AGATCCGCAT TGTCGCACTG
GATACACGGC TGACAGGACA AGTATTGACC GATGCTGTCG CTAATGCAGA TTTAGTGCTG
GATTGCAGTG ACAATATGGA GACACGCCAT CAGGTGAATG CCGCCTGTGT CGCGGCACAA
AAACCACTAA TCAGCGGCAG TGCTGTAGGG TTCAGTGGAC AACTGTTGGT GATTGAACCG
CCCTATGCCC AAGGCTGCTA CGCCTGTATT TATCCAGATA AAGAGTTGTC TCAACGTAAC
TGCCGTACCG CGGGTGTTCT GGGGCCGGTG GTCGGTGTCA TCGGTACCTT GCAGGCGCTG
GAAGCCATTA AAATGCTCGC GGGAATACCA TTAGCACTGA GCGGTAAATT GCGGCTATTT
GATGGCAAAC AGCAGAGTTG GAGCACCCTG CAACTGACAA GGGCAGCCCA TTGCCCGGCG
TGTGGAGGTG GGTTGTGA
 
Protein sequence
MKNDQTLSDS EFLRYSRQLL LEDIGPEGQR KLKGASVLIV GLGGLGSPAA LYLAAAGVGQ 
LLLADDDQLD LTNLQRQILY RTADIGQTLS NPTSSVSHNK ARLAQRHLQQ LNPQIRIVAL
DTRLTGQVLT DAVANADLVL DCSDNMETRH QVNAACVAAQ KPLISGSAVG FSGQLLVIEP
PYAQGCYACI YPDKELSQRN CRTAGVLGPV VGVIGTLQAL EAIKMLAGIP LALSGKLRLF
DGKQQSWSTL QLTRAAHCPA CGGGL