Gene YPK_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0319 
Symbol 
ID6087653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp340887 
End bp341426 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content47% 
IMG OID641595379 
ProductDNA topoisomerase type IA Zn finger domain-containing protein 
Protein accessionYP_001719085 
Protein GI170022580 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.020229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAGA AAGTTATTAC TAAGGATAAT GGATCTTGTC CTGAGTGCGG GTCAGCGTTG 
GTGATTCGCA GTGGGGGGCA CGGTCCATTC CTTGGTTGTT CACATTATCC AGATTGCCAG
TATATACGCC CACTAAAAGC GCAGGCTGAC GGGCATGTTG TGAAAACTCT GGAAGGGCAA
CCTTGTCCTG AGTGTGGTTC GGATATGGTG CTACGCCAAG GCCGCTTCGG TATGTTTATT
GGTTGCAGCC AATATCCACA GTGTGATCAT ACAGAAGTTA TAGATAAACC TGATGAGACG
TCTATTGATT GCCCACAGTG TGGTCAAGGG AAACTGTTAC AACGTAAGTC TCGGTTTGGG
AAAGTTTTTC ATGCCTGTAA TCGCTACCCC GACTGTCAAT TTACGCTCAA CCAACCGCCA
ATTGCAGGAA AGTGTGGTTA TTGCCACTAC CCACTGTTAA TAGAAAAAAG AACGGCACGG
GGTATCAAAC GTATCTGTGC CAGTAAGTTA TGTGGGAAGG CTGTAGCCAG TGAGTCATAG
 
Protein sequence
MTKKVITKDN GSCPECGSAL VIRSGGHGPF LGCSHYPDCQ YIRPLKAQAD GHVVKTLEGQ 
PCPECGSDMV LRQGRFGMFI GCSQYPQCDH TEVIDKPDET SIDCPQCGQG KLLQRKSRFG
KVFHACNRYP DCQFTLNQPP IAGKCGYCHY PLLIEKRTAR GIKRICASKL CGKAVASES