| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0317 |
|---|
| Symbol | |
|---|
| ID | 6087527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 339280 |
|---|
| End bp | 340401 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641595377 |
|---|
| Product | DNA protecting protein DprA |
|---|
| Protein accession | YP_001719083 |
|---|
| Protein GI | 170022578 |
|---|
| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
|---|
| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.595486 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGCAG CAGAACTATG GCTACGGATG ACTCAGGTTA AAGGGCTTGG AGTCGTGAAA
CGTAGTGCGT TGGCCAAGCG ATTACTTGCC AGTGGTGATA TTCATCCGGG GAGGTTAGCT
GCCTACGGGC TAGATTCACA ACAGTGTCAT CAGTTTGCTC AGTTGTCACC CCGTTATATT
GCAGACACGC TAGAGTGGCT AAGTGACCCC AACCACCATT TACTCACTTA TGGTGAGCCT
GGCTATCCAC CCCGCTTAGT TCATATTGCT GGGGCACCGT TAGTCCTCTT TGTTTCCGGC
GAACTTGATG TTCTCTATCG CCCACAGATC GCAATGGTTG GTAGCCGTCA TTTCAGCCAC
TATGGTGAGC AGTGGGGAAG ATATTTTGCC TCAGAGTTGG CTCGCACAGG GTTAGTTATC
ACTAGTGGTT TAGCTGTAGG CATCGACGGA ATTTGTCATC AGGCGGCTCT GAATATTCAA
GGGAGAACTA TTGCTGTGCT AGGGAGTGGG TTGGAGAACA TATATCCACA GCGGCACAGT
CGTTTGGCTA AAGAAATTGA ATATCAAGGC GGCGCTTTGG TTTCTGAATT TTTAACGACG
GCGTTACCTA TTGCTGCTCA TTTCCCCAGA AGAAATCGAA TTATCAGCGG GCTAAGTGAT
GCTGTGTTAG TCGTTGAGGC CACTTTAAAA AGTGGCTCTT TGATTACCGC TCGTTATGCG
ATGGATCAAG GAAGAGATGT GTTCGCATTA CCGGGGCCAT TAGGCAGTGC TAGCAGCGAA
GGAACACATT GGCTCATTCA ACAAGGCGCT TATTTGGCAA CGTCTGTTAA AGATGTCTCA
GAGCAGGTCA GTGGTTCTTT GCAATGGTTA TCATTGCCAG AGGAAGTAAT TATTTCTTCA
CCGAAGGAGC AAGTTGAATT GCCATTTGCT GATGTGTTGG CTAACGTAGG GGATGAGGTG
ACACCTGTTG ATGTTGTCGC CGAACGTGCC GGCCAACCTG TGCAAGATAT TGCCAGCAAA
TTGCTCGAGC TGGAGTTAGC AGGGTGGATC GCAGCTGTAC CCGGCGGCTA TGTCCGAATA
AGGAGGGCAG GCCATGTTCG ACGTTCTAAT TTACTTATTT GA
|
|---|
| Protein sequence | MLAAELWLRM TQVKGLGVVK RSALAKRLLA SGDIHPGRLA AYGLDSQQCH QFAQLSPRYI
ADTLEWLSDP NHHLLTYGEP GYPPRLVHIA GAPLVLFVSG ELDVLYRPQI AMVGSRHFSH
YGEQWGRYFA SELARTGLVI TSGLAVGIDG ICHQAALNIQ GRTIAVLGSG LENIYPQRHS
RLAKEIEYQG GALVSEFLTT ALPIAAHFPR RNRIISGLSD AVLVVEATLK SGSLITARYA
MDQGRDVFAL PGPLGSASSE GTHWLIQQGA YLATSVKDVS EQVSGSLQWL SLPEEVIISS
PKEQVELPFA DVLANVGDEV TPVDVVAERA GQPVQDIASK LLELELAGWI AAVPGGYVRI
RRAGHVRRSN LLI
|
|---|
| |