Gene YPK_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0315 
Symbolfmt 
ID6087146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp337661 
End bp338608 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content47% 
IMG OID641595375 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001719081 
Protein GI170022576 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGATT CTTTGCGGAT TATTTTTGCC GGAACTCCTG ATTTTGCAGC GCGCCATTTA 
GGCGCGTTGC TCTCTTCTCA ACATAAGATT GTTGGTGTGT TCACTCAACC AGACCGCCCG
GCTGGCCGAG GTAATAAACT CACCCCCAGC CCAGTTAAAA TATTGGCAGA ACACCACGGC
ATCCCTGTTT TTCAGCCCAA GTCATTAAGA CCTGAAGAGA ACCAACATTT AGTTGCCGAC
CTCAATGCTG ACATCATGGT CGTAGTGGCT TATGGCTTAA TACTACCTGC AGCGGTGTTA
GCGATGCCAC GTTTAGGCTG CATCAATGTT CATGGTTCGT TACTCCCACG TTGGCGTGGT
GCAGCACCGA TCCAACGTTC AGTATGGGCG GGTGACGAAA AAACGGGGAT TACTATCATG
CAGATGGATA TCGGGTTAGA TACCGGTGCT ATGCTGCATA AAATTGAATG TGCCATTCAA
CCAGAAGATA CCAGTGCGAC ACTGTATGAT AAATTAGCAC AATTGGGGCC TCAAGGGCTG
TTGATAACAT TACAACAGCT AGCCGCAGGC ACAGCCCTAG CAGAAGTTCA AAATGAAACA
CAAGCAACCT ATGCGGAGAA GCTAAGTAAA GAGGAAGCCA AATTAGATTG GACACTTTCT
GCAACTCAGT TAGAACGCTG TATCCGTGCA TTTAACCCTT GGCCTGTCAG CTATTTTATT
GTTGATGAAC AGCCAATCAA AGTTTGGCAA GCGCAGGTAC TCCCTGCTGG CGAGGATGCA
GAACCAGGCA CCATTATCCA TGCAGATAAG CATGGTATCC AAGTTGCAAC TGCTGATGGC
GTTTTGAATA TCACACAACT CCAGCCTGCA GGGAAAAAAG CAATGTCAGC CGCTGACTTA
TTAAACTCTC GGCGAGAATG GTTTATACCA GGTAGTCAAC TAGTGTAA
 
Protein sequence
MSDSLRIIFA GTPDFAARHL GALLSSQHKI VGVFTQPDRP AGRGNKLTPS PVKILAEHHG 
IPVFQPKSLR PEENQHLVAD LNADIMVVVA YGLILPAAVL AMPRLGCINV HGSLLPRWRG
AAPIQRSVWA GDEKTGITIM QMDIGLDTGA MLHKIECAIQ PEDTSATLYD KLAQLGPQGL
LITLQQLAAG TALAEVQNET QATYAEKLSK EEAKLDWTLS ATQLERCIRA FNPWPVSYFI
VDEQPIKVWQ AQVLPAGEDA EPGTIIHADK HGIQVATADG VLNITQLQPA GKKAMSAADL
LNSRREWFIP GSQLV