Gene YPK_0302 details

Gene Information

• Locus tag: YPK_0302
• Symbol: rplO
• ID: 6090493
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 328095
• End bp: 328529
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641595362
• Product: 50S ribosomal protein L15
• Protein accession: YP_001719068
• Protein GI: 170022563
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00000713012
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTTAA ATACTCTGTC TCCGGCTGAA GGTGCCAAGC ATGCGCCGAA GCGTGTAGGT 
CGTGGTATTG GTTCTGGCCT GGGTAAAACC GCTGGTCGTG GTCACAAAGG TCAGAACTCA 
CGTTCTGGTG GTGGCGTACG TCGTGGTTTT GAAGGTGGTC AGATGCCTTT ATATCGTCGT 
TTGCCGAAAT TCGGCTTCAC CTCTCGCAAA GCGATGATCA CGGCAGAAGT TCGTCTGTCT 
GAACTTGCTT TAGTGGAAGG CGACGTAATC GACCTGAACA CGCTGAAAGC CGCTAACGTT 
GTTGGTATCC AGATGGAGTT CGTGAAAGTT ATACTTTCAG GCGAAGTCAA TCGTGCGGTA 
ACTCTTCGTG GTCTGCGAGT CACCAAAGGC GCTCGTGCTG CTATCGAAGC TGCTGGCGGT 
AAAATTGAGG AATAA 

 

Protein sequence

MRLNTLSPAE GAKHAPKRVG RGIGSGLGKT AGRGHKGQNS RSGGGVRRGF EGGQMPLYRR 
LPKFGFTSRK AMITAEVRLS ELALVEGDVI DLNTLKAANV VGIQMEFVKV ILSGEVNRAV 
TLRGLRVTKG ARAAIEAAGG KIEE