| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0301 |
|---|
| Symbol | rpmD |
|---|
| ID | 6090533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 327912 |
|---|
| End bp | 328091 |
|---|
| Gene Length | 180 bp |
|---|
| Protein Length | 59 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641595361 |
|---|
| Product | 50S ribosomal protein L30 |
|---|
| Protein accession | YP_001719067 |
|---|
| Protein GI | 170022562 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1841] Ribosomal protein L30/L7E |
|---|
| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000735954 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA CTATTAAAGT AACTCAAACA AAAAGCAGTA TCGGTCGTTT GCCGAAACAT
AAGGCAACTC TGATCGGTTT AGGTCTGCGT CGTATTGGTC ATACTGTAGA GCGTGAGGAT
ACTCCTGCTG TGCGTGGTAT GGTCAACTTG GTTTCCTACA TGGTTAAAGT TGAGGAGTAA
|
|---|
| Protein sequence | MAKTIKVTQT KSSIGRLPKH KATLIGLGLR RIGHTVERED TPAVRGMVNL VSYMVKVEE
|
|---|
| |