| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0277 |
|---|
| Symbol | |
|---|
| ID | 6088872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 313972 |
|---|
| End bp | 316080 |
|---|
| Gene Length | 2109 bp |
|---|
| Protein Length | 702 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641595337 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_001719043 |
|---|
| Protein GI | 170022538 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000112388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGTA AAACACCCAT TGAGCGCTAT CGTAATATCG GTATCAGCGC TCACATCGAC
GCCGGTAAGA CAACCACTAC CGAACGTATC CTGTTTTACA CCGGTGTAAA TCACAAAATC
GGTGAAGTTC ATGACGGCGC AGCCACCATG GACTGGATGG AACAGGAGCA GGAGCGTGGT
ATTACCATTA CTTCTGCAGC TACTACCTGC TTCTGGTCTG GTATGGCTAA ACAGTTCGAA
CCACATCACG TCAATATCAT TGACACCCCT GGGCACGTTG ACTTCACTAT CGAAGTAGAG
CGTTCCATGC GTGTTCTTGA CGGCGCGGTA ATGGTTTACT GTGCAGTTGG TGGTGTTCAG
CCACAGTCTG AAACCGTATG GCGTCAGGCT AATAAATATA AAGTTCCACG TATTGCGTTC
GTTAACAAAA TGGACCGTAT GGGTGCGAAC TTCCTGCGCG TAGTTGGTCA ACTGAAATCT
CGCCTTGGTG CGAACCCAGT TCCACTGCAG TTGGCAATTG GCGCAGAAGA AAAATTCACC
GGTATTATCG ATCTGGTGAA AATGAAAGCG ATCAACTGGA ACGAAGCTGA TCAGGGCGTG
ACCTTCGAAT ATGAAGAAAT CCCTGCTGAT ATGGCTGAAC TGGCTGCTGA ATGGCACCAG
AATCTGGTTG AATCTGCGGC AGAAGCGTCT GACGAGCTGA TGGACAAATA CTTGGGTGGC
GAAGAGCTGA CCGAAGAAGA AATCAAGAAA GCTTTACGTC AACGTGTTCT GAAAAGCGAA
ATTATTCTTG TTACCTGTGG TTCTGCGTTT AAAAACAAAG GCGTACAGGC AATGCTGGAT
GCGGTTATTG AGTACCTGCC TGCACCAACT GACGTTGAAT CAATCAACGG CATCTTGGAT
GATGGCAAAG ATACTCCGGC TGTTCGTCAT TCTGACGACA AAGAGCCGTT CTCTGCTCTG
GCGTTCAAAA TCGCTACCGA CCCATTCGTG GGTAACCTGA CGTTCTTCCG CGTGTACTCT
GGTATTGTTA ATTCCGGTGA TACCGTTCTG AACTCAGTGA AATCGCAACG TGAACGCTTA
GGTCGTATCG TACAGATGCA CGCTAACAAG CGTGAAGAGA TCAAAGAAGT TCACGCCGGT
GATATCGCAG CCGCTATCGG TCTGAAAGAT GTGACTACGG GTGACACTTT GTGTGACCCG
AATAATCCGA TCATCTTGGA ACGTATGGAG TTCCCAGAGC CGGTAATCTC TGTTGCTGTT
GAACCAAAAA CCAAAGCTGA CCAAGAAAAA ATGGGTATGG CTCTGGGGCG TTTGGCGAAA
GAAGATCCAT CATTCCGCGT TTGGACTGAC GAAGAATCTG GTCAGACTAT CATCGCTGGT
ATGGGTGAGT TGCATTTGGA TATCCTGGTT GACCGTATGC GCCGCGAATT TAACGTGGAA
GCAAACGTCG GTAAACCTCA GGTTGCGTAC CGTGAAACTA TCCGCGAAAC CGTTAAGGAT
GTGGAAGGTA AGCACGCTAA GCAGTCAGGC GGTCGTGGTC AGTATGGTCA TGTTGTTATC
GACATGTCTC CATTGCCACC GGGTGGTGTT GGGTATGAAT TCGTCAACGA AATCGTTGGT
GGTTCTATTC CTAAAGAATT CATTCCGGCC GTTGATAAAG GTATTCAAGA ACAGCTGAAA
TCTGGCCCTC TGGCAGGTTA CCCAGTTGTT GACGTTAAAG TGCGTCTGCA CTACGGTTCT
TACCATGACG TTGACTCCTC AGAATTGGCA TTTAAATTAG CTGGTTCTAT CGCCTTTAAA
GAAGGTTTCA AACGAGCTAA ACCAGTTCTG CTTGAGCCAA TCATGAAGGT TGAAGTCGAA
ACCCCTGAAG ATTACATGGG TGACGTAATG GGCGACCTGA ACCGTCGTCG CGGTATCATC
GAAGGTATGG AAGATACTGC TACCGGTAAA ACTGTTCGCG TCAAGGTTCC GTTGTCTGAA
ATGTTCGGTT ATGCTACTGA CCTGCGTTCT CAGACTCAGG GCCGTGCTTC TTACTCCATG
GAATTCTTGG AGTATGCTGA AGCACCGAGT AACGTCGCTA AAGCCGTTAT CGAAGCCCGT
GGCAAATAA
|
|---|
| Protein sequence | MARKTPIERY RNIGISAHID AGKTTTTERI LFYTGVNHKI GEVHDGAATM DWMEQEQERG
ITITSAATTC FWSGMAKQFE PHHVNIIDTP GHVDFTIEVE RSMRVLDGAV MVYCAVGGVQ
PQSETVWRQA NKYKVPRIAF VNKMDRMGAN FLRVVGQLKS RLGANPVPLQ LAIGAEEKFT
GIIDLVKMKA INWNEADQGV TFEYEEIPAD MAELAAEWHQ NLVESAAEAS DELMDKYLGG
EELTEEEIKK ALRQRVLKSE IILVTCGSAF KNKGVQAMLD AVIEYLPAPT DVESINGILD
DGKDTPAVRH SDDKEPFSAL AFKIATDPFV GNLTFFRVYS GIVNSGDTVL NSVKSQRERL
GRIVQMHANK REEIKEVHAG DIAAAIGLKD VTTGDTLCDP NNPIILERME FPEPVISVAV
EPKTKADQEK MGMALGRLAK EDPSFRVWTD EESGQTIIAG MGELHLDILV DRMRREFNVE
ANVGKPQVAY RETIRETVKD VEGKHAKQSG GRGQYGHVVI DMSPLPPGGV GYEFVNEIVG
GSIPKEFIPA VDKGIQEQLK SGPLAGYPVV DVKVRLHYGS YHDVDSSELA FKLAGSIAFK
EGFKRAKPVL LEPIMKVEVE TPEDYMGDVM GDLNRRRGII EGMEDTATGK TVRVKVPLSE
MFGYATDLRS QTQGRASYSM EFLEYAEAPS NVAKAVIEAR GK
|
|---|
| |