| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0262 |
|---|
| Symbol | |
|---|
| ID | 6091206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 301543 |
|---|
| End bp | 302523 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641595322 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001719028 |
|---|
| Protein GI | 170022523 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCA TCTTGGTGAT CCGAATTGAT TTTCTCGGCG ATATGGTTTG TACCACGGCG
CTATTACATG CGCTGAAACA ACGTTGGCCA GCAGCAGAAA TCCACGTATT AGCGAATAAA
TATAATCAAT CCGTGCTGGC ACGTAATCCT GATGTCAGTG CGGTCCACAC TTATGTTTAC
AGCAAACAAT GTGAGAGAAA CCAGCGGCCA GGCCGGCTCA TGGCCCTTTT TGATCGGCTA
GCATTAATTT GGCGGCTACG GCGTTTAGGC TTCGATCTGC TGCTCATTCC CAATGGTGGC
ATGAACAAAA ACAGTATTCA GTTTGCCAAA CAGCTCAATG TGGCAGATCG CCGTTGGCAT
ACGGCTGAAA CTGAGTTTGA CGACCGTAAT CCTGAACATG TTGCCACGCG GCCAATCCGT
CACGAAGCCC TCTCGGGATT TGCACTGATG CCTGAACTGG GGCGGGTAGA CATCGAAACA
CTTAAGCTGC ATGTCTACCC AGAGCCACAA TTGCAGGCAA AATGGCGGGC CGATCTTGGG
GAAAAAGACC GGCCACGTGT CGGGCTATTT ATCTCTAATA AATCCGCCCA ACGGCGCTGG
AGTTGGGATA AGTGGCGTCA ATTGGCATTG AAACTCAATG CACAGGCTGA ATTGCTCATT
TTTCATGATC CAGCAGAACA ACCATCCGAG CAGCAATTAG CGGGGCTAAC CGCCCGTTGT
CTGTCAACGC CATCCACTGA CGACCTGATG GCGGCGATGA GCCAGTTGGA TTTGGTGATT
TCCGCCGACA GCGCACCGGT ACATATCGGC TCCGCATTAC AAATACCCGT GGTGGCCTTG
TTTGAATCCC GGCCAGAGAA GTACCTACGC TGGTATCCGC TAGGTGTTCG CCATGTGCTC
GTCCATGCCG GGCCACAAGT TGAAGACATC CATGTTGATG CTGTCGAGTC TGCCGCCCGT
TCACTGTTGA CCACAGATTA A
|
|---|
| Protein sequence | MQRILVIRID FLGDMVCTTA LLHALKQRWP AAEIHVLANK YNQSVLARNP DVSAVHTYVY
SKQCERNQRP GRLMALFDRL ALIWRLRRLG FDLLLIPNGG MNKNSIQFAK QLNVADRRWH
TAETEFDDRN PEHVATRPIR HEALSGFALM PELGRVDIET LKLHVYPEPQ LQAKWRADLG
EKDRPRVGLF ISNKSAQRRW SWDKWRQLAL KLNAQAELLI FHDPAEQPSE QQLAGLTARC
LSTPSTDDLM AAMSQLDLVI SADSAPVHIG SALQIPVVAL FESRPEKYLR WYPLGVRHVL
VHAGPQVEDI HVDAVESAAR SLLTTD
|
|---|
| |