Gene YPK_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0248 
Symbol 
ID6087088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp291043 
End bp291675 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content47% 
IMG OID641595308 
ProductcAMP-regulatory protein 
Protein accessionYP_001719014 
Protein GI170022509 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCTCG GTAAGCCACA AACAGACCCG ACTCTCGAAT GGTTCCTGTC TCATTGCCAT 
ATCCATAAGT ACCCATCCAA AAGTACGCTG ATTCACCAGG GTGAAAAAGC CGAAACGCTG
TACTACATCG TGAAAGGCTC CGTTGCGGTG CTGATCAAAG ATGAGGAAGG CAAAGAGATG
ATCCTCTCCT ATTTAAACCA GGGGGATTTC ATCGGCGAGC TTGGACTGTT TGAAGAAGGC
CAAGAACGCA GTGCTTGGGT GAGAGCAAAA ACGGCCTGTG AAGTGGCTGA AATTTCTTAC
AAAAAGTTCC GTCAACTGAT TCAGGTTAAT CCAGATATCT TGATGCGCCT CTCTTCACAG
ATGGCGAATC GCTTACAAAT AACATCGGAG AAAGTGGGTA ACCTCGCTTT CCTTGACGTT
ACTGGACGCA TTGCACAAAC ACTGCTTAAT CTGGCAAAAC AACCTGATGC CATGACCCAC
CCAGATGGAA TGCAGATCAA AATTACCCGC CAGGAAATTG GTCAAATAGT TGGCTGCTCC
CGCGAAACTG TGGGGCGGAT ACTAAAAATG CTGGAAGATC AGAACTTGAT CTCCGCACAC
GGTAAAACGA TTGTCGTTTA CGGCACCCGT TAA
 
Protein sequence
MVLGKPQTDP TLEWFLSHCH IHKYPSKSTL IHQGEKAETL YYIVKGSVAV LIKDEEGKEM 
ILSYLNQGDF IGELGLFEEG QERSAWVRAK TACEVAEISY KKFRQLIQVN PDILMRLSSQ
MANRLQITSE KVGNLAFLDV TGRIAQTLLN LAKQPDAMTH PDGMQIKITR QEIGQIVGCS
RETVGRILKM LEDQNLISAH GKTIVVYGTR