Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0245 |
Symbol | argD |
ID | 6088560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 287394 |
End bp | 288611 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641595305 |
Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
Protein accession | YP_001719011 |
Protein GI | 170022506 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases [TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.110716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA AGTTAGCAGT GAATCGCAAC ACATTCGATC AGGTCATTTT GCCTGTTTAT GCACCCGCGC AGTTTATCCC AGTAAAAGGG AAAGGCAGCC GAGTGTGGGA TCAACAAGGT ACGGAGTACA TTGATTTCGC CGGTGGCATT GCGGTTACCG CACTGGGCCA TTGCCATCCG GCACTGGTAT CCGCATTGCA TCAGCAGGGT GAAACGTTGT GGCACACCAG TAATGTGTTT ACCAATGAGC CAGCACTGCG TTTAGCACAG AAGCTGATTG CCGCAACCTT TGCTGACCGG GTTTTCTTTG CCAACTCGGG TGCTGAAGCG AATGAAGCGG CATTTAAGTT AGCTCGCCAT TACGCTATTG AGCGTCATAG CCCCTATAAA ACCAAGATTA TTGCTTTCCA CAATGCGTTT CATGGCCGCA CCCTGTTTAC GGTCTCTGTC GGGGGGCAGC CAAAGTATTC CGATGGTTTT GGCCCGAAAC CCGCGGATAT CATCCATGTC CCGTTTAATG ATCTGGCGGC AGTGAAAGCG GTGATGGATG ATCACACCTG TGCCGTGGTA CTGGAACCGA TTCAGGGAGA GGGCGGGATC ACTTCTGCCA CGCCAGAGTT CCTACAAGGG GTGCGCGCGT TGTGCGATCA ACATAACGCC CTGCTGGTGT TTGATGAAGT GCAAAGCGGT ATGGGGCGCA GTGGCAAGTT GTTTAGCTAT ATGCATTATG GTGTGACGCC GGATATCCTT ACCACGGCGA AGGCATTGGG CGGTGGCTTC CCAATCAGTG CGATGCTAAC GACCGAAGAG ATCGCTTCAG TGATGACGGT GGGTACCCAC GGAACCACCT ATGGGGGTAA TCCTCTGGCC TGTGCGGTCG CTGAGGCCGC GTTGGATGTG ATTAATACCC CTGAGGTACT TAATGGTATT GAACAGCGCC ATGGTCTGTT TGTGCAGGCG CTACAAAGCA TCAACAGCAA GTATGATGTT TTCAGTGATA TTCGTGGTAT GGGGTTGTTG ATTGGCGCGG AGTTAACCGC GAAATACCGG GGGCAGGCGC GTGAGTTCCT GGCCGCCGCT GCCGCTAACG GCTTGATGAT CCTCAATGCG GGTCCAGATG TTCTGCGGTT AGCGCCCTCG CTGGTGATTG AATTGGAGGA TATCCAGCAA GGGATGGCGC GGTTGGAGAA AGCAATGGCG AGTGTGATCA AAGGTTAA
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Protein sequence | MTDKLAVNRN TFDQVILPVY APAQFIPVKG KGSRVWDQQG TEYIDFAGGI AVTALGHCHP ALVSALHQQG ETLWHTSNVF TNEPALRLAQ KLIAATFADR VFFANSGAEA NEAAFKLARH YAIERHSPYK TKIIAFHNAF HGRTLFTVSV GGQPKYSDGF GPKPADIIHV PFNDLAAVKA VMDDHTCAVV LEPIQGEGGI TSATPEFLQG VRALCDQHNA LLVFDEVQSG MGRSGKLFSY MHYGVTPDIL TTAKALGGGF PISAMLTTEE IASVMTVGTH GTTYGGNPLA CAVAEAALDV INTPEVLNGI EQRHGLFVQA LQSINSKYDV FSDIRGMGLL IGAELTAKYR GQAREFLAAA AANGLMILNA GPDVLRLAPS LVIELEDIQQ GMARLEKAMA SVIKG
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