Gene YPK_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0242 
Symbol 
ID6090217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp284007 
End bp284576 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content45% 
IMG OID641595302 
Productpeptidyl-prolyl cis-trans isomerase A (rotamase A) 
Protein accessionYP_001719008 
Protein GI170022503 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.940567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAC GTACTTTAGT GACCTTCATT GCCCTATGTT CCCTCAGCGC CGTAGCGCCT 
GCTGCTTTAG CTGCCGGTGA GCCTCATGTG TTGTTAACAA CGTCGGCCGG GAATATTGAG
CTGGAGCTCA ATAGCCAGAA GGCACCCATT TCAACCCAGA ATTTCGTTGA TTATGTTAAC
AATGGTTACT ATAACAACAC TATTTTCCAC CGTGTTATCC CTGGCTTTAT GATTCAAGGC
GGCGGTTTTA CCGCAGATTT CAAAGAAAAA ACGCCTAAAA CACCAATCAA AAATGAAGCA
GATAATGGCC TGCGTAACCT ACGTGGTACC ATTTCGATGG CCCGTACTGC AGATAAAGAC
AGCGCCACCA GTCAGTTCTT CTTGAACGTG GCAGACAATG CTTTCCTTGA CCACGGCCAA
CGTGACTTTG GTTATGCGGT ATTCGGTAAA GTCGTTAAAG GCATGGATGT CGTCGAAAAA
ATTTCTCAGG TTCAGACAGA AAACGTCGGC CCTTATCAGA ATGTACCCGT TAAACCGATC
ACTATCCTGT CAGCAAAAGT TTTACCTTAA
 
Protein sequence
MFKRTLVTFI ALCSLSAVAP AALAAGEPHV LLTTSAGNIE LELNSQKAPI STQNFVDYVN 
NGYYNNTIFH RVIPGFMIQG GGFTADFKEK TPKTPIKNEA DNGLRNLRGT ISMARTADKD
SATSQFFLNV ADNAFLDHGQ RDFGYAVFGK VVKGMDVVEK ISQVQTENVG PYQNVPVKPI
TILSAKVLP