Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0235 |
Symbol | |
ID | 6089907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 272900 |
End bp | 275446 |
Gene Length | 2547 bp |
Protein Length | 848 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641595295 |
Product | nitrite reductase (NAD(P)H), large subunit |
Protein accession | YP_001719001 |
Protein GI | 170022496 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA TAAAAATTGC CATCATTGGC AACGGCATGG TCGGCCACCG CTTTATCGAA GACTTATTGG ATAAAGCGGA TAAGGACCAA TTTGATATAA CCGTATTTTG CGAAGAACCC CGCATTGCTT ACGATCGTGT GCATCTTTCC TCTTACTTCT CTCATCATAC CGCAGAAGAA CTGTCACTGG TTCGCGAAGG CTTTTATGAA AAACAGGGCG TGAAGGTGCT GGTGGGTGAA CGCGCCATCA CGATCAACCG TGCTGAAAAA GTGATTCACT CCAACAGTGG CCGAAGCCTG TATTACGACA AGTTGGTGAT GGCAACGGGT TCTTATCCGT GGATCCCACC TATTAAAGGT AGCGAAGGGC AAGATTGCTT TGTTTACCGC ACCATTGAAG ACCTGAATGC CATTGAGGCC TGTACCCGTC GCAGCAAACG TGGTGCCGTC ATTGGCGGTG GCCTATTAGG GCTGGAAGCC GCAGGGGCAT TAAAGAGCCT CGGCGTTGAA ACCCATGTGA TTGAATTTGC TCCCGTCCTA ATGGCTGAAC AGCTTGATCC GATGGGCGGT GACCAACTGC GTCAGAAAAT TGAACGCATG GGGGTCAGAG TTCATACCGG TAAGAATACC CAAGAAATTG TACATTCCGG CCAAAATAGC CGCAAAACCA TGTTGTTTGC TGATGGGACG CAGTTGGAAG TTGATTTTAT CGTCTTCTCC ACCGGTATCC GTCCGCAGGA TAAACTGGCG AATCAATGTG GTTTAGCCAC TGCCCGCCGT GGTGGTATTG CTATCAATGA TTATTGCCAG ACATCCGATC CTGATGTCTA CGCCATTGGC GAGTGTGCGT CATGGCAGGA ACGAACTTTC GGGCTGGTCG CGCCGGGTTA TAAAATGGCG CAGGTTGCCG CAGACCATCT GTTAGGCCGT GAGAATGCTT TCCTCGGTGC TGATATGAGC GCCAAACTGA AGCTGCTGGG CGTGGATGTT GGCGGGATTG GTGATGCCCA TGGCCGTACT GAAGGTGCAC GCAGCTACGT TTATCTGGAT GAAAGCAAAG AAATTTACAA GCGTTTGGTG GTCAGTGCCG ATAACAAAAC CCTATTGGGT GCCGTACTGG TTGGCGATAC CACCGATTAC GGTAATCTGC TGCAACTGGC GTTGAATAAC ATCACATTAC CGGAAAACCC AGACAGCCTG ATCCTGCCCG CCCATACAGG TAATAAACCC ACCATCGGGG TGGATTCCCT GCCAGATAGC GCCCAGATTT GCTCCTGCTT TGATGTGACC AAAGGCGACA TTATTCGGGC GATTGGACAG GGCTGCCAGA CTGTCGCCGC GCTAAAATCC GCGACCAAAG CCGGGACCGG TTGTGGCGGC TGTATTCCGC TGGTCACCCA AGTATTGAAT GCCGAATTAA GTAAGCAAGG CATTGAAGTT AATAATCATT TATGTGAACA CTTCGCCTAT TCACGCCAAG AACTGTATCA CTTGATCCGC GTTGAAGGGA TTAAGACGTT TACCGAATTA CGGGAAAAAT ACGGCAAGGG CTACGGTTGT GAAGTCTGTA AACCGACGGT CGGTTCACTG CTGGCGTCGT GCTGGAATGA GTATGTGCTG GAGCCACAGC ATACGCCGTT GCAGGATACC AATGATAACT TCCTCGGTAA TATTCAGAAA GATGGCACCT ACTCGATTAT TCCTCGTTCA CCAGGCGGTG AAATCACACC GGATGGCCTG CTCGTCGTTG GTCAGATCGC CAAAGAATAT AACCTGTATA CCAAACTGAC CGGTTCCCAA CGGATAGGGA TGTTTGGCGC ACAAAAAGAT GACCTACCGG CTATCTGGGC ACGGTTGATT GACGCGGGCT TTGAAACGGG TCATGCCTAC GCCAAAGCAC TGCGTATGGC AAAAACCTGT GTTGGCAGTA CCTGGTGCCG CTTCGGTGTC GGGGATAGCG TTGGCTTTGG TGTGGCCTTG GAACATCGCT ACAAAGGTAT CCGCGCACCG CACAAAATAA AATTTGGCAT CTCTGGTTGT ACCCGTGAAT GCGCAGAAGC TCAGGGCAAA GACGTGGGGA TCATCGCCAC TGAAAATGGC TGGAATCTGT ATGTCTGCGG CAACGGCGGC ATGAAACCGC GTCACGCGGA TTTACTGGCA GCCGATTTGG ATGAAGAGAC GCTAATGCGC TATCTCGACC GCTTTATGAT GTTCTACATC CGCACCGCCG ATAAACTACA ACGCACCTCC GTCTGGCTGG AAAGTTTGGA AGGGGGGATT CGCTACCTAC AATCGGTGAT CCTTGAGGAC AAACTGGGCA TTAACGATCA ACTGGAAGCA GAGATCGCCC GTCTGCGCGA CAAGGTCGCC TGCGAGTGGA AAGCCACTGT CGAGAACCCA GCAGCACAAG TGCGTTTTGC TCACTTTATT AATAGCTCAC TGCGTGACCC GAATGTACAA GTCGTGCGCG AACGAGAGCA ACACCGCCCG GCCCGCCCAG ATGAACGCAT CCCGGTCAGG GTTTTGGAAC TGGAGGATAA CGCATGA
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Protein sequence | MSKIKIAIIG NGMVGHRFIE DLLDKADKDQ FDITVFCEEP RIAYDRVHLS SYFSHHTAEE LSLVREGFYE KQGVKVLVGE RAITINRAEK VIHSNSGRSL YYDKLVMATG SYPWIPPIKG SEGQDCFVYR TIEDLNAIEA CTRRSKRGAV IGGGLLGLEA AGALKSLGVE THVIEFAPVL MAEQLDPMGG DQLRQKIERM GVRVHTGKNT QEIVHSGQNS RKTMLFADGT QLEVDFIVFS TGIRPQDKLA NQCGLATARR GGIAINDYCQ TSDPDVYAIG ECASWQERTF GLVAPGYKMA QVAADHLLGR ENAFLGADMS AKLKLLGVDV GGIGDAHGRT EGARSYVYLD ESKEIYKRLV VSADNKTLLG AVLVGDTTDY GNLLQLALNN ITLPENPDSL ILPAHTGNKP TIGVDSLPDS AQICSCFDVT KGDIIRAIGQ GCQTVAALKS ATKAGTGCGG CIPLVTQVLN AELSKQGIEV NNHLCEHFAY SRQELYHLIR VEGIKTFTEL REKYGKGYGC EVCKPTVGSL LASCWNEYVL EPQHTPLQDT NDNFLGNIQK DGTYSIIPRS PGGEITPDGL LVVGQIAKEY NLYTKLTGSQ RIGMFGAQKD DLPAIWARLI DAGFETGHAY AKALRMAKTC VGSTWCRFGV GDSVGFGVAL EHRYKGIRAP HKIKFGISGC TRECAEAQGK DVGIIATENG WNLYVCGNGG MKPRHADLLA ADLDEETLMR YLDRFMMFYI RTADKLQRTS VWLESLEGGI RYLQSVILED KLGINDQLEA EIARLRDKVA CEWKATVENP AAQVRFAHFI NSSLRDPNVQ VVREREQHRP ARPDERIPVR VLELEDNA
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