Gene YPK_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0232 
SymbolcysG 
ID6089558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp270092 
End bp271513 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content53% 
IMG OID641595292 
Productsiroheme synthase 
Protein accessionYP_001718998 
Protein GI170022493 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTACT TCCCGATCTT CTGCCAACTG CAACACAAAG CCTGCCTGCT GGTTGGCGGT 
GGAGAAATTG CTGAACGCAA AGCGCGGCTG TTATTGGATG CAGGTGCGTT AGTCACCGTC
AATGCCTGCG AGTTCACCCC CCAGTTTCAC CATTGGGCAG ATCAGGGGCA ACTTTCATTA
ATCAGCGGTG AATTTGTGCC CGAACTGTTG GCCGATAAAT GGCTGGTCAT TGCCGCCACC
GATCAGTTGT CCGTCAATGC ATTAGTCTAT CAAAGCGCCA ACCAGCAACG GATCTTCTGC
AATGTGGTTG ATGATCCGAA ACGCACCAGC TTTATCATGC CATCTATTAT TGATCGCTCC
CCCATCATGA TCGCGGTCTC CTCTGGCGGT AAAGCGCCCG TGTTGGCCCG GTTGTTGCGC
GAAAAGCTGG AAGCCCTGTT ACCGCAACAT TTGGGGCAAC TGGCGCAACT GGCGGGGAAC
TTACGCCAGC GGGTGAAGCA GCATTTTGCC GCGATGACCG AACGTCGCCG GTTCTGGGAA
AAGTTGCTGA CCCACGACCG TCTGGCACAA TCTTTAGCCA ATAACGATCA CGTGCAAGCC
GATCAACATG TTGAACAACT GTTTAGTGCT CCACTCACTG ATCGTGGCGA AGTGGTGTTG
GTCGGTGCAG GGCCGGGAGA TGCTGGTTTA TTGACCTTAA AAGGGTTGCA GCAAATCCAA
CAGGCCGATG TGGTGGTCTA TGACCGGCTG GTCTCCGATG AGGTGATGAA TTTGGTCCGG
CGTGATGCCG AGCGCATCTT TGTCGGCAAA CAATCGGGCC ACCACTGTGT GCCGCAAGAG
CAAATCAACC AAATCCTGTT ACAGCAGGCA CAGTCAGGTA AGCGGGTAGT GCGTTTGAAA
GGTGGCGACC CGTTTATTTT TGGTCGGGGC GGCGAAGAGT TAGAAGAGTT GGCAGGCTAC
GGTATTCCTT TCTCCGTGGT CCCAGGCATT ACCGCCGCAT CCGGTTGCTC GGCTTACAGT
GGTATTCCAC TGACTCACCG TGACCATGCG CAAAGCGTGC GGCTGGTCAC CGGTCATGCC
AAAAAAGAGG GCCAGTTAGA TTGGGCAAAT CTGGCGGCAG AGAAACAAAC ATTAGTTTTT
TATATGGGGC TATCGCAGGC TGGAGAGATC CAACAGCAAT TGATTCAACA TGGTATGCCA
GCGACCACTC AGGTTGCCTT AGTCGAAAAC GGCACCTCAC GGCATCAGCG GGTTGTGAGT
GGCGAGTTAA GCCAATTGGC CTTACTCTCC CAACAGGTCA GTAGCCCTAG CCTGATTATC
GTCGGTAGCG TGGTCAGCCT ACGGGAAAAA CTGAATTGGT TTTCCAGCCG CCATCACGAT
GATCAGCCCA AAGTGACTGA ATGTGTGGCT CATGTTGGTT AA
 
Protein sequence
MDYFPIFCQL QHKACLLVGG GEIAERKARL LLDAGALVTV NACEFTPQFH HWADQGQLSL 
ISGEFVPELL ADKWLVIAAT DQLSVNALVY QSANQQRIFC NVVDDPKRTS FIMPSIIDRS
PIMIAVSSGG KAPVLARLLR EKLEALLPQH LGQLAQLAGN LRQRVKQHFA AMTERRRFWE
KLLTHDRLAQ SLANNDHVQA DQHVEQLFSA PLTDRGEVVL VGAGPGDAGL LTLKGLQQIQ
QADVVVYDRL VSDEVMNLVR RDAERIFVGK QSGHHCVPQE QINQILLQQA QSGKRVVRLK
GGDPFIFGRG GEELEELAGY GIPFSVVPGI TAASGCSAYS GIPLTHRDHA QSVRLVTGHA
KKEGQLDWAN LAAEKQTLVF YMGLSQAGEI QQQLIQHGMP ATTQVALVEN GTSRHQRVVS
GELSQLALLS QQVSSPSLII VGSVVSLREK LNWFSSRHHD DQPKVTECVA HVG