Gene YPK_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0227 
Symbol 
ID6089193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp265373 
End bp266362 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content48% 
IMG OID641595287 
Producthypothetical protein 
Protein accessionYP_001718993 
Protein GI170022488 
COG category[S] Function unknown 
COG ID[COG3266] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00312118 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATT TAAAGCTGGA TGACGATCTG AAACCAGATA GCAGTGATCG TCGTCCTACA 
CGCTCTCGCA AGTCCCCAAC CGGGCCTAAA CTTGCTGTTT CACGCCAACA TATGATGATT
GGTATTGGCA TTTTAGTGTT GCTATTGATC ATTATCGCTA TCGGTTCTGC CTTGAAAGCA
CCTACCGAAC ATGAAGCGTC CCAACAAAAC CCAAATGTTA ATGCGGCGCG AGATATCAAC
TTATCTGATT CGTCTTCGTT AACCAGTGGT AATAATAGCC AGCCCAGTAT TGCGAACAAT
ACCAGCGATG GTCATGATGC CAGTGGTGTA AAGAATACGG CTCCACCGCA AGATATCAGT
GCTCCGCCAA TTTCGCCAAC GCCAACCGAG GCTGCAATAC CGCCTTCGGC TAACAGCACG
ACTCAGCGGA TTGAATTGCC TGGTAATATG TCCGATGCCC TCTCTCAGAC CCAAGGGCAG
GTGGATACGT TATCTCAGAA TATCAGTGAC GCTCATACAT CAACACTACC AACGGCGGCA
GCAACTGTTG CTCCATCGAA AGGGGCAAAA GTACCTGCTA CGCGTGAAAC GATTACGCAA
CCGGTACAGA AACAGGCCAC TAAGCAACCG GCGGTTAACC ATAAAAATAC CGCAACTGTG
GCCGTTCCTC CTGCTACATC GGGTACGCCT AAATCAGGCG CAGCCAGTAG TCGTGCATTG
AGCAGTGCGC CGAGTAGCCA CTACACGCTG CAATTAAGCA GCGCATCGCG CTCAGACACC
CTGAATGCCT ACGCAAAGCA GCAAAATTTA ACTGACTATC ATGTGTACGA AACCAAACGT
GATGGTAAGC CTTGGTACAT TCTAGTGAGT GGTAATTATG CCTCCTCTGC GGAGGCAAAA
AAGGCAATCA CAACATTACC CGCTGATGTT CAAGCGAAAA AGCCATGGGT TAAGCCTGTA
CAACAAGTAC AGCAAGACCT TAAAAAATAA
 
Protein sequence
MDDLKLDDDL KPDSSDRRPT RSRKSPTGPK LAVSRQHMMI GIGILVLLLI IIAIGSALKA 
PTEHEASQQN PNVNAARDIN LSDSSSLTSG NNSQPSIANN TSDGHDASGV KNTAPPQDIS
APPISPTPTE AAIPPSANST TQRIELPGNM SDALSQTQGQ VDTLSQNISD AHTSTLPTAA
ATVAPSKGAK VPATRETITQ PVQKQATKQP AVNHKNTATV AVPPATSGTP KSGAASSRAL
SSAPSSHYTL QLSSASRSDT LNAYAKQQNL TDYHVYETKR DGKPWYILVS GNYASSAEAK
KAITTLPADV QAKKPWVKPV QQVQQDLKK